KEGG   Xenorhabdus doucetiae: XDD1_0420
Entry
XDD1_0420         CDS       T03784                                 
Symbol
hfq
Name
(GenBank) Protein hfq
  KO
K03666  host factor-I protein
Organism
xdo  Xenorhabdus doucetiae
Pathway
xdo02024  Quorum sensing
xdo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xdo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    XDD1_0420 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XDD1_0420 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xdo03019]
    XDD1_0420 (hfq)
   03036 Chromosome and associated proteins [BR:xdo03036]
    XDD1_0420 (hfq)
Messenger RNA biogenesis [BR:xdo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     XDD1_0420 (hfq)
Chromosome and associated proteins [BR:xdo03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    XDD1_0420 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: CDG16123
UniProt: A0A068QMN5
LinkDB
Position
405343..405645
AA seq 100 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHGNNQGVPTGVGNYHAGTNPAAQQESDGAE
NT seq 303 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctctgcaagatccattcctgaacgctttacgacgtgaaagggtc
ccggtttctatttatttggtcaacggcatcaaattacaggggcagattgaatcttttgac
caatttgtcattttactgaaaaacacggttagccagatggtctataaacatgccatctct
actgttgtgccttcccgcccagtgtcccaccatggtaacaaccagggtgtgccgactggc
gttggaaattatcacgctggcactaacccagcagcacaacaggaaagcgatggcgctgaa
taa

DBGET integrated database retrieval system