Xanthomonas dyei: NYR95_18670
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Entry
NYR95_18670 CDS
T09460
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xdy
Xanthomonas dyei
Pathway
xdy00040
Pentose and glucuronate interconversions
xdy01100
Metabolic pathways
xdy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xdy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NYR95_18670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NYR95_18670
Enzymes [BR:
xdy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
NYR95_18670
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
WOB56310
LinkDB
All DBs
Position
complement(4313763..4314860)
Genome browser
AA seq
365 aa
AA seq
DB search
MLSAALLSTTAYAADPALEVATTGWATQNGGTKGGSKASAADTYTVSNAAQLKAALKASA
GSNGRIIKVKGVIDISEGKAYTKTSDMKTRARLDIPTKTTLIGVGTNAEIREGYFYVKAN
DVIVRNLTIENPWDPEPKWDADDGDNGNWNSEYDGLTVEGASNVWVDHVTFTDGRRTDDQ
NGTANGRPKQHHDGAMDVKKGANFVTISYSVFKSHEKNSLIGSSDSASSTDSGKLKVTIH
NTLFENISARAPRVRFGQVHLYNNYHVGSTSNKVYPFSHAHGVGKESKIFSENNAFDISG
VSSCDKIAADYKGSVYRDQGSLLNGKALSCSWNSNIGWKPPYTYNLLSANKVAADVKAKA
GAGKL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgttgagcgccgcgttgttgtcgaccaccgcttatgcagcagaccccgcgctggaggtt
gccaccaccggctgggccacccagaacggcggcaccaaaggcggttccaaggcctccgca
gcggacacctataccgtcagcaacgcagcgcagttgaaggctgcgctgaaggctagtgcg
ggtagtaacgggcgcatcatcaaggtcaagggtgtcatcgacatcagcgaaggcaaggca
tacaccaagacctcggacatgaagacgcgtgcgcgtctggatatccccaccaagaccacc
ttgatcggcgtcggcaccaacgccgaaatccgcgaaggctatttctacgtcaaggccaac
gacgtcatcgtgcgcaacctcaccatcgaaaatccgtgggatccggaaccgaagtgggat
gccgacgatggcgacaacggcaactggaattccgagtacgacggtctgaccgtggaaggc
gccagcaacgtgtgggtggaccacgtcacctttaccgatggccgccgcaccgacgatcag
aacggcaccgccaacggccggccgaagcagcaccacgacggcgcaatggacgtcaagaag
ggcgccaacttcgtgaccatctcgtactcggtcttcaagtcgcacgagaagaacagcctg
atcggctccagcgacagcgcctccagcaccgacagcggcaagctcaaggtaaccatccac
aacaccttgttcgaaaacatctccgcgcgcgcgccgcgggtacgtttcggccaggtgcat
ctgtacaacaactaccacgtgggcagcaccagcaataaggtctacccgttctcgcacgcg
catggcgtgggcaaggaatcgaagatcttctccgagaacaatgccttcgacatcagcggt
gtgagcagttgcgacaagatcgccgccgattacaagggcagcgtgtaccgcgaccagggc
tctctgctcaatggcaaggcgttgagctgctcctggaacagcaacatcggctggaagccg
ccgtatacctacaatctgctgtctgccaacaaggtggctgccgacgtcaaggccaaggcc
ggtgcaggcaaactataa
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