Xenia sp. Carnegie-2017 (soft corals): 124441983
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Entry
124441983 CDS
T08024
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124441983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124441983
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124441983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124441983
NCBI-ProteinID:
XP_046848423
LinkDB
All DBs
Position
Unknown
AA seq
232 aa
AA seq
DB search
MANEDREIKNSAALRSLSGDLGLLNKTDGSACFSHGNTSAMAGVYGPAEVRFNKEIVNKA
TVEVVYRPKTGIPGCAEKSMERLIRNTCESAILTSMHPRSAMTIVLQEICNDGSLISCCI
NAGCMAMLNAGYPMRYLIASITIAILDDDVIITDPDGKQEKNAKAVITFAFDSVNKDIIL
LTSKGKFSINQFETCLMVARDCSQKIFDFYRTSIGRFLSKDVKFMDLNIAKQ
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagatagagaaataaagaattctgcggcattgcgctcacttagcggggat
ttaggtcttttaaataaaacagatggatctgcttgcttttcgcatggcaatacatcagcg
atggcaggagtttatggtcctgctgaagtacgatttaataaagagatagttaataaagct
actgttgaagtggtgtatcgtccaaaaaccggcattcctggttgtgctgagaaatcaatg
gaaagattgatcagaaatacttgtgaatctgctatactgacatcaatgcatccacgatca
gctatgactattgtgttacaagaaatctgcaatgatggatctttgatatcatgttgtatc
aatgcagggtgtatggcaatgttgaatgctggttatccaatgagataccttatagcctca
attaccatagcgatactggatgatgatgtaattataacagacccagatggcaaacaagaa
aagaatgcaaaagcagttattacatttgcctttgattcagtcaacaaagatataattcta
ttgaccagcaaaggaaaatttagtataaatcagtttgagacatgtttgatggtggcgcgt
gattgctctcagaaaatatttgacttttatcgaacctccattggtcgttttttgtcaaag
gatgtgaagttcatggatctaaatattgcaaagcaataa
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