Xenia sp. Carnegie-2017 (soft corals): 124442789
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Entry
124442789 CDS
T08024
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04120
Ubiquitin mediated proteolysis
xen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124442789
04120 Ubiquitin mediated proteolysis
124442789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124442789
Enzymes [BR:
xen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124442789
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124442789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
124442789
NCBI-ProteinID:
XP_046849239
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MRGWLLSIGSIVLTCLVLGNAYHQKRQFYPSVVYITKSNPSLAVLYLQAFVFVLLLGQLS
RKMFFGQLRAAETEHLIERSWYAVTETCLAFTVFRDNFSPLFVAQFTMLLFLKCFHWLSE
DRVEYMERSPLISFLFHFRVLSLLTLLGTLDSVLIHKAYHSILTSGASTQLVFGFEYAIL
LTIVVAVFMKYVLHTIDLQSPNPWENKAVCILYSELIMGFIKSLLYIIFMLIMVRVHTFP
LFAIRPMYLTFRSFKKSVSDVIMSRRAILNMNTLYPDATPEELANGDNVCIICREEMTGQ
AKKLPCNHIFHVSCLRSWFQRQQTCPTCRMDVLQPPRVTQPAPPAGVEVPPQAGGGPPPF
PMFPRGFFPPGAHPVALQAGIPVPPPPAPPFTPGQVPPPPFAAGQVPPPPFAAGQVPPPP
FAAGQIPPPPFAPGQVLPPPFAPGQVPQPPLPGQAPQPAAPGQVPTSSASSSSQSPFPNM
VPGFLPPFLPPFPILPPMLGFQNPMNASNINPCLSLEELQLMEGVERRNVEARIAVLKNI
HSLLDAAISQLNQYSKVVTGKPPSTFTPDAECTAGTSSASNVAPEGENLVSSTADIPGPS
MTGTIDDVLTSTSDVTQPKPEPIIAENANKENLESSNDDLRQRRILRFSSRPDNEDE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggctggttattaagtattggaagtattgttctgacatgtttggtattagggaat
gcgtaccatcaaaaaaggcaattttatccttcagtcgtctacattaccaagtccaaccca
agcttagcggtgctctatttgcaagccttcgtgtttgttttacttcttggacaactgtct
cgaaaaatgttttttggtcaactgcgagctgctgaaactgagcatctaattgaacgatca
tggtatgctgtgacagagacttgcctggcattcacagtgtttcgagataacttcagtcct
ctctttgttgcccagttcaccatgttattatttctcaagtgttttcactggttgtctgag
gatagagtggaatatatggagagaagtcccttgatttcttttctctttcattttcgagtc
ttaagtcttctgaccttacttggaactctagactctgtgctcattcataaagcttatcac
agcatcctcacaagtggagcttcaacacaacttgtgtttggttttgagtatgccatattg
ttgacaatagttgttgccgtgtttatgaagtatgttctacatacaattgatttgcaaagt
ccaaatccttgggaaaataaagctgtttgcattttatacagcgagcttattatgggtttc
attaaatccttgctttacattatatttatgttgataatggttcgtgtccatacatttcca
ttgtttgctatcagaccaatgtacttaaccttccggtcattcaagaaatctgtgagtgat
gtgattatgtccagaagagcaattctcaacatgaacacactttatcctgatgccacacca
gaagaacttgcgaatggagacaatgtatgcatcatttgtcgtgaagagatgactggtcaa
gcaaagaagttaccttgtaatcatatattccatgttagctgtctacgttcatggtttcaa
cgtcagcaaacctgtccaacatgtcgtatggatgtgttgcaaccacctcgtgtgacacaa
cctgcaccacctgcaggtgttgaagtacctcctcaagcaggtggcgggcctcctccattt
cccatgtttccgagggggttctttccaccaggtgcccatcctgttgcactccaagctggt
attcctgttcccccaccacctgctccaccatttacacctgggcaagttcccccaccacca
tttgcagctgggcaagttcccccaccaccatttgcagctgggcaagttcccccaccacca
tttgcagctgggcaaattcccccaccaccatttgcacctgggcaagttctcccaccacca
tttgcacctgggcaggttccccaaccaccattacctggacaagctccccaaccagctgct
ccaggtcaagttcccacctcatctgcctcatctagttctcagtcaccattcccaaacatg
gtaccaggctttcttccaccatttctccctccatttccaatattacctcctatgcttgga
tttcaaaaccccatgaatgcatcaaacattaatccatgtttatctctggaagaactccaa
ttgatggaaggtgttgaaagaagaaatgttgaagcccgtattgcagttttgaaaaatatt
cattctttacttgatgctgcgatttcacagctaaatcaatattcaaaggttgtgactgga
aaacctccgagcacttttacaccagacgctgaatgcacagctggaacatctagtgccagt
aatgttgcacctgaaggcgaaaaccttgtatcatcaactgcagatatccctggaccgagt
atgactggtacaatagatgacgtactaacatctacatctgatgtaacacaacctaagcct
gaaccaatcattgcagagaacgccaataaggagaaccttgagtctagcaatgatgattta
cgtcaacgaagaatcttgagattttcatctcgacctgataacgaagacgagtaa
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