Xenia sp. Carnegie-2017 (soft corals): 124443029
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Entry
124443029 CDS
T08024
Name
(RefSeq) RNA helicase aquarius-like isoform X1
KO
K12874
intron-binding protein aquarius
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124443029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124443029
Spliceosome [BR:
xen03041
]
Complex B
Other components
Prp19-related factors
124443029
Complex C
124443029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
AAA_16
UvrD-helicase
DEAD
AAA
AAA_22
SLFN-g3_helicase
UvrD_C_2
DnaB_C
PhoH
RecA
Parvo_NS1
nSTAND3
ATPase
DUF2129
Motif
Other DBs
NCBI-GeneID:
124443029
NCBI-ProteinID:
XP_046849501
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MYRVYGTIDKGKKERQGGFAPTIQQINADILTQIANTYWAPHQDHLPYDPRVIEKIYEKD
LLGCSFSIQRIMLLEFSQYLENFLWPNFNSDKASLAHVMSIVVMVNEKFRESVPPWEIFK
SYPEQFQGFFQRVLDISILEESVSIKEKVVILHFLIHCFSSLEVDVIRKQVQQLVSLPMW
SCLLPGRLQQELKRIPKYRKYWAHLNKKDAKCDENTLKRLQWERLYLSNLIKSFFNILDS
MKDPDSLDKDKIHFSERFLELLVDLEALLPTRRFFNTVLDDAHVVERCSLSFLAKEPKKG
KLFTQLLDMLRFYAGFEINDVTGSALTDHEMVNIHYCKITSLQRAAFKNFPELYNFSLSN
VASVDTREALLKQFEPLEERKLHDICAHLNLLPKLEDKQSCLDKDLLLEILISRHERRLS
QIDALNNMPLYPTEQILWDENIVPSQFYSGEECLALPKLNLQFLTLHDYLLRNLNLFRLE
STYEIRQDIEDVVKHMRPWSNEIGHTEFRGWARMSLPISSFTVVEVAKPNIGENRPSRVR
ADVTIDLNLRREIKAEWESIRKHDVIFLVCCRPAKVTAASLDPNQLFKEKYGIDYVRGAE
IEGMLDEEGKIIEDGPEPKPEFKRDTRTFRLWLDTNQYQQDMTAAVQGKEDVYETFNIVI
RRKPKENNFKAVLETIRDLMNTECIVPDWLHDIFLGYDDPGSAHYTRMPNQIKNLNFNDT
FLNMEHLKASFPKYSVKAPNNDADQLTPPFKITFPEEQDKSNKNDDVVDALPEIIVEPFV
TPNRGPYPYNQPKRNAIPFTPTQVEAIRSGMQPGLTMVVGPPGTGKTDVAVQIISNLYHN
FPEQRTLIVTHSNQALNQLFEKIMALDVDERHLLRLGHGEEALETEKDFSRYGRVNFVLA
KRLELLAEVQRLQESLKVHGDVSYTCETAGYFFLYQVVARWEEFSSKLRKRKNEVAAIAE
LFPFTSFFSNAPQPVFKGKTWMEDMEIAEGCYRYIKRIFQQLEEFRAFELLRSGADRSNY
LLVKEAKIIAMTCTHAALKRRDLVELGFKYDNVLMEEAAQILEIETFIPLLLQTAEDGFN
RLKRVTLIGDHHQLPPVIKNMAFQKFSNMEQSLFTRFVRLGVPTVDLDAQGRARPSLCNL
YNWRYKKLGNLQHVFNWPEYCTANPGFLYDFQLINVEDFNGVGESEPNPYFYQNLGEAEY
AAAIFMFMRLLGYPAEKIAILTTYNGQKHLIRDVIRKRCAENPLIGWPSKITTVDRYQGQ
QNDYIILSLVRTRTIGHIRDVRRLVVAMSRARLGLYILARVNLFRNCFELTPAFDQLTSR
PLNLVIALNERYPSQRSYNAAPTHGTFSVKDMPHMHRIVYDMYQTIVSEMNAQQQLEQQQ
QSIPQPPQTEARTTQGKEEMEQSIVPEASQPSTESMSMSEDPPGSPIINEVEEEDVM
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgtatagggtgtatgggactatagataaaggaaagaaggaacgtcaaggtggttttgct
cctactatccaacagattaatgcagacatattgactcaaattgcaaacacttactgggca
cctcatcaagatcatctgccatatgatcccagggtcattgaaaaaatttatgaaaaagat
cttttgggatgcagtttttcaattcaaaggatcatgcttttggaatttagtcaatactta
gaaaattttctctggcccaatttcaattcagataaggcttcacttgcccatgtcatgtct
attgttgtcatggtgaacgagaaatttcgtgaaagtgttccaccttgggagatcttcaag
tcatatccagaacagttccagggattttttcaacgcgttctggacatcagtattcttgaa
gagtctgtttcaatcaaagagaaagttgtgatattacattttctaatccattgcttcagc
agtttggaggtagatgtgattcgaaagcaggttcaacaactggtctcattaccaatgtgg
tcttgtttgttacctggtcgtcttcaacaagagttaaaacggattccaaaatacagaaag
tactgggctcatctcaacaagaaagatgcaaaatgtgatgaaaatactttaaaaaggcta
caatgggagagattgtatctgtctaatttaataaaatcattcttcaacattttggattca
atgaaagatcctgactcattggataaagacaaaattcatttctctgaacggttccttgaa
ttgcttgtggatcttgaggctcttcttcccacaagaaggttcttcaacactgttcttgat
gatgctcatgttgttgaacggtgctctctttcttttcttgcaaaagagccaaaaaaaggc
aaattgttcactcaacttctagacatgttacgcttttatgctggttttgaaatcaatgat
gttactggttctgctctcactgatcatgaaatggtgaacattcattattgtaaaataaca
tcacttcagagagctgctttcaagaattttcctgaactttataatttctcactaagcaat
gtggcaagtgtcgatacaagagaggctttattgaagcaatttgaacctttagaggagaga
aaactgcatgatatttgtgctcacttgaacctgctgccaaaacttgaggataaacaatct
tgtttggataaagatcttctacttgagatattgatatcgcgtcatgaaagaagactttct
caaattgatgccctcaacaacatgcctctatatccaactgaacagatcttatgggacgaa
aatattgttccatctcaattttactctggtgaagagtgtcttgcgttgccaaaactcaat
ttacaattcttgacgcttcacgactatcttttgcgaaatttaaatctgtttcgtctcgag
tcaacgtatgaaataagacaagatattgaagatgtcgtgaaacatatgcgaccatggtca
aatgaaattggtcacactgagtttcgaggttgggcgcgaatgagtctgccgatatcaagt
ttcactgtagtggaggttgcaaagccaaatatcggagagaatcgaccatcacgagttcgt
gctgacgtcacgattgatcttaatcttcgacgcgagataaaagctgagtgggaatcgatc
agaaaacacgatgttatttttcttgtatgttgtcgacctgctaaagttacggctgcttct
ctcgatcctaaccaactcttcaaggaaaagtatggtattgattatgttcgcggtgccgag
atcgaaggaatgttggatgaagaaggaaaaattatagaagatgggcctgaacctaagcct
gaattcaagagagatacacgtacatttagattatggttagacacaaaccagtatcaacag
gatatgactgcagccgttcaaggtaaagaggatgtttacgagactttcaacattgtcata
agacgaaagccaaaagaaaacaactttaaggctgtgctagaaactattcgagatttgatg
aacacggaatgtatcgttcccgactggctacacgatatcttcctgggttatgacgatccg
ggatctgcacattataccagaatgcccaatcaaatcaaaaatttaaacttcaatgacacc
tttctaaacatggaacatttaaaagctagttttcccaaatattcggtgaaggctccgaat
aacgacgctgaccagttgactcctccgtttaaaataacttttccagaagaacaggacaag
tctaacaaaaatgacgatgttgtcgatgcattgccagaaataattgttgaacctttcgtt
actcctaatagaggaccatatccatataatcaaccgaaacgaaatgcaattccttttact
ccaactcaagttgaagcaatccgttctggaatgcaacccggtctaacaatggttgttggt
ccacctggcacaggaaaaactgacgttgcagttcaaattatatcaaatttatatcacaat
tttcctgagcaaagaacacttatcgtcacccattctaatcaggctttgaatcaacttttc
gagaaaatcatggctctagatgttgacgaacgacatttgttgcgtcttggacatggcgag
gaagctctggaaacagagaaggactttagcagatatggacgcgtaaactttgtcttggca
aaacgattagagcttcttgctgaagttcaaagattacaggagagtctgaaagttcatggt
gatgtctcatatacgtgtgaaacggctgggtatttcttcctatatcaggttgtggcaaga
tgggaagagttctctagtaaactgcgcaaacggaaaaatgaagttgcagccatcgcggaa
ctttttccttttacatcattcttttcaaacgctcctcagcccgtctttaaaggaaagacg
tggatggaagatatggagattgctgaggggtgctatcgctacattaaaagaatttttcaa
cagttggaggagtttcgtgctttcgagcttttacggagtggtgctgataggtctaattat
ttactcgtgaaagaagcgaagattattgccatgacctgcactcatgctgctctcaaaaga
cgcgatcttgttgagttgggatttaagtatgacaatgtgctcatggaggaagcagctcaa
attttagagattgagacattcattccactcttacttcagactgctgaagatggcttcaat
cgtttgaagagagtcaccttgattggtgatcatcatcagttacctcctgtcatcaagaac
atggcttttcagaagttctccaacatggagcagtcgctctttacgagatttgttcgtctt
ggtgtaccaactgtggatctagatgctcaaggtcgtgctagaccaagtctatgtaatttg
tacaattggcgctacaagaagctggggaatttacaacatgttttcaactggcccgagtac
tgcacagctaacccaggatttctctacgactttcaacttattaatgttgaagattttaac
ggggttggtgaatccgaacccaatccgtatttctatcagaatctcggggaagcagaatat
gcagctgccatattcatgtttatgcgattacttggttatcctgccgaaaaaattgctatc
ctcacaacgtacaacggtcagaaacatctgattcgtgacgtcatcaggaaacgatgcgcc
gaaaatcctcttattggttggccttcaaagatcacaactgtggatcgttatcaaggacaa
caaaatgactacattatcctgtcattggtgcgcacgagaactatcggccacatacgagat
gtacgtcggttggtcgtcgcaatgtctcgtgcccgccttggactatatatcttagctcgc
gtcaatctatttaggaattgttttgaactaaccccagcttttgatcagctgacatcaaga
cctttgaatcttgtcatcgccttgaacgaacgatatccttcccaaagatcgtataatgct
gctccaacacatggaacattttcagttaaagacatgcctcatatgcatcgtattgtctac
gatatgtatcaaacaattgtgtctgagatgaacgcccaacagcagttggaacaacaacag
caatcaattcctcaaccacctcaaacagaggctcgaacaactcaaggcaaagaagaaatg
gagcaatctattgtgccagaagcttcccaaccttcaactgaaagtatgtcaatgtcagag
gacccccctggttcacctattattaatgaagttgaggaagaagatgtaatgtga
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integrated database retrieval system
