Xenia sp. Carnegie-2017 (soft corals): 124447524
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Entry
124447524 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124447524
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124447524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124447524
NCBI-ProteinID:
XP_046854436
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MSVISPFEDRMEEMRSDVSNPPTEMRNLNEKMPFFMIPCSNSNSPPSLNSLIGAVRRGIL
MTERYLGKAKNEDLSITDIDDFGRNIFHLSVQREELLKILLKHFEEHEQLMEALHSEDIN
GHTPAHVAVLHNKRESLQILASADENIYTLRSSKKGQTLIHCAVYSCNPYIVEDILSARP
ESLFDKDDGGKSPQHYAAALEECFLLDFLLSQGANILETDNNMSTLLHEAAYAGSISNVK
LLSFDEVTLLLATDSGERTPLHVACAKGFRSIVSFLLENGADPLLRTTGGESCLEIAVIH
KQEHIVNELLLSADWKNLVCDWKNGAKKCFAYLIEKMPDQAKLLLDRCVATSDHKQNSHD
YNISYDFFLFHSPGSNPPAFHALQAILKNNEEKCLTHKLCRKYLSVKWREKGCYIFLIDL
ILFVCFHILFNAYVALVRGGIAKKMLQNHENGTISEKYPEPVANPKDTGPLIATSIIFTL
TIFNVLKEFVQMCSFGWNYFKQPSNYFEWTLFLFVLYFIFPITASKTENQFGAAAIAICI
SWFDLIWFLRRIPDIGTYILTIQKTMKTLLKMLLIILLFCMAYASTFYLLLAERERFKNF
PIAILSTFVSMLGDFGYDDLFLNIGYYKTFHSFKLFMFVIFILLMVIVINNVLIGLAVGD
TQDVIKKATVQRLRQHMKFMMAVEYSLFTRLPCFRRRKHAIVYTEYPNHKKSFTDNLNRF
FAGEMNTFYNDEESDDEVERDTLTRQQLEEVLKVRFEEHHKKIMKEISDFHSEVLEKVVE
VVNDRKNA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcatctctccatttgaagaccgaatggaagaaatgagatcggacgtaagcaat
ccgcctacagaaatgagaaacctaaatgaaaaaatgccattcttcatgattccatgttct
aattcgaattctcccccatcacttaactcattgattggagctgttcgacgaggcattctt
atgacggagcgatatcttggaaaggcaaagaatgaggacctcagtataacagacattgat
gacttcggaagaaatatatttcatcttagtgttcaaagagaagagctactgaaaattctt
ttaaaacattttgaggagcatgagcaactcatggaagctctccacagtgaggatataaat
ggtcacactccggctcatgttgctgtgttgcacaataaaagagagagcctacaaattctt
gccagtgcggatgagaatatttacactcttcgtagttcaaagaaaggacagacattgatc
cattgtgcagtttattcgtgcaatccatatatcgtagaagatattctttcggctcgacct
gaatccctctttgataaagatgatggaggaaaatcaccgcagcattacgccgctgctctt
gaggaatgctttctattggactttctcctctcgcagggcgcaaacattttggaaactgat
aacaacatgtcaacattgcttcacgaagctgcttacgctgggtctatatccaacgttaaa
ctgctgagtttcgatgaagtcactctgttacttgcaaccgactcgggagagagaacacca
ttacatgttgcctgtgccaaaggttttcgaagtattgtctcatttctactggaaaatggt
gctgatccacttttaagaactaccggtggtgaaagctgtctggaaattgctgtcatccac
aaacaagagcacatagttaatgagctactgctgagtgccgactggaaaaacctcgtttgt
gattggaagaatggagcgaagaaatgctttgcgtaccttattgagaaaatgccggatcaa
gcgaagctattgctagatcgttgtgttgcgactagtgatcacaagcaaaattctcatgac
tacaatattagctacgacttttttctttttcatagtccaggttctaatccacctgcattt
catgcactccaagcaatcctcaaaaataacgaagagaagtgcttgactcacaagctttgc
aggaaatatttgagtgttaaatggcgagagaaaggttgctatatatttttgatcgatttg
atcctttttgtatgttttcacatcttgttcaatgcctatgtcgctctagtccgcggtggt
attgctaaaaagatgcttcaaaatcacgagaatggtacaatatcagagaaatatccagag
cctgttgcaaaccctaaagacactggaccacttattgctacctctattatttttacctta
acaatattcaacgttctcaaagaatttgtgcagatgtgttcgtttggctggaactatttc
aagcaaccgtcaaactactttgaatggactttgtttttgttcgttttgtatttcattttt
ccaatcacagcatccaagaccgaaaatcagtttggcgcagcagcaattgcaatttgcatt
tcttggtttgatctcatctggttcttacgaagaattcctgacatcggcacttatatttta
acaatacagaagacgatgaaaactttattgaagatgctcctaataattttgctgttttgt
atggcatatgcatcaacgttttacctactgctggctgaaagagaacgattcaaaaacttt
cctatcgctatccttagtacgtttgtttcgatgcttggtgactttggttacgatgatcta
ttcctgaacattggttattacaagacttttcattcttttaaacttttcatgtttgttatt
ttcatactgttgatggtgatcgttataaataatgtgttgattggcttagctgtcggagat
acccaggacgtgataaaaaaggcaacggtgcaaaggcttagacaacatatgaaattcatg
atggcagtagaatattcgctgtttactcgattgccttgtttccgtcgaaggaaacatgca
attgtgtacacggaatatccaaatcacaaaaaatccttcacggataatttgaatcgattt
tttgccggagaaatgaacactttctacaatgatgaggaaagcgacgatgaagttgaacgt
gacactctcacacggcagcagctcgaggaagttttgaaagttagatttgaggagcatcac
aagaaaataatgaaagaaattagtgattttcattcggaagtgttggaaaaagtggtcgag
gtggttaatgaccgcaaaaatgcttga
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