Entry |
|
Name |
(RefSeq) THO complex subunit 4-like
|
KO |
|
Organism |
xen Xenia sp. Carnegie-2017 (soft corals)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:xen00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124449415
09122 Translation
03013 Nucleocytoplasmic transport
124449415
03015 mRNA surveillance pathway
124449415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:xen03019]
124449415
03041 Spliceosome [BR:xen03041]
124449415
Messenger RNA biogenesis [BR:xen03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124449415
TREX complex
124449415
Spliceosome [BR:xen03041]
Complex C
Other components
EJC/TREX
124449415
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124449415
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
231 aa
MDKLDMSLDDIIKINKKNRGGSGSRGRGRNMSRGGPIRRGRTRNTPYSRQTGARQLPYKW
QHDLFDGNGGESKRQSVAGGLSTGTKLHISNLDFAVSETDIQELFSEFGKMKRSCVHYDA
SGRSHGTAEVVYQNRNDALSAIKQYNGVPLDGRPMKIEIVADVKNSQMQRPFYNERRQTG
GGFRGRRGSGGGRRGFGRGRGGGNRKMKTAEELDAELDEYNAKVDSDQWDL |
NT seq |
696 nt +upstreamnt +downstreamnt
atggataagcttgatatgtcactcgatgatatcataaagataaacaagaagaacagaggt
ggttcaggatcaagaggtcgcggtagaaatatgtctagaggtggaccgataagacgtggc
cgaacaagaaacacaccatactcgaggcaaactggcgctcgacagttaccatacaaatgg
caacatgatctttttgatggaaatggtggagagagtaagcgtcagtcagtagctggtggc
ttatctacaggaaccaaacttcacatctcaaacttagattttgccgtttcagagacagac
attcaagaacttttcagcgagtttggtaagatgaagcgatcgtgtgttcattatgatgca
tcaggccgatcacatggaactgcggaagttgtgtatcagaatcggaatgatgctttgagt
gctatcaaacagtataatggtgtacctcttgatggccgaccaatgaagattgaaatagtt
gcagatgtaaaaaattcacaaatgcaacgtccattttacaatgaaagacgtcagactggt
ggcggtttccgtggacgaagaggttctggcggtggacgtagaggatttggaaggggtcga
ggtggtggaaaccgcaaaatgaaaacagcagaggagttagatgcagaactggatgagtac
aatgctaaggttgattcagatcaatgggacctataa |