Xylella fastidiosa 9a5c: XF_1378
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Entry
XF_1378 CDS
T00033
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
xfa
Xylella fastidiosa 9a5c
Brite
KEGG Orthology (KO) [BR:
xfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfa03400
]
XF_1378
DNA repair and recombination proteins [BR:
xfa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
XF_1378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Rubredoxin_2
SLFN-g3_helicase
AAA_22
DnaB_C
Lon_C
GvpD_P-loop
AAA_16
AAA_24
PAXNEB
Rad51
nSTAND3
AAA_5
MCM
AAA
RecA
GvpD_bR2
ABC_tran
AAA_30
AAA_29
DAP3
Zn_ribbon_SprT
Motif
Other DBs
NCBI-ProteinID:
AAF84187
UniProt:
Q9PDK1
LinkDB
All DBs
Position
complement(1324927..1326318)
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AA seq
463 aa
AA seq
DB search
MTKNAASKARIAYVCTECGTEYSKWQGQCTECSTWNCLSQITLGHAGTVKNPTMKHGNWT
GQLDPPKITALKDVQHSEQARISTGIGEFDRVLGGGLVAGAVVLIGGDPGIGKSTLLLQA
LARMASTLPTLYVTGEESLTQVAGRAVRLDLPLEGLNALAETGIESILQHASSARPRLIV
ADSVQTLWTETLTAAPGSVSQVRESAAQLVRYAKETGTTVFLVGHVTKEGGIAGPRVLEH
MVDAVLYFEGESGSRFRLLRAFKNRFGAVNELGVFAMSEKGLKEVANPSAIFLSGRNSNQ
PGSCVMVTREGTRPLMIEVQALVDTSPLSNPRRVTVGLEQNRLAMLLAVLHRHGNVLVGD
QDVFINIVGGIRVQETAADLPVLLAIRSSLCNRALPEKTIAFGEVGLSGEIRPVPNGEER
LREAATHGFKRAIVPKANAPKSAIKDMQIIAVERLDQALEASY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaacgccgcaagcaaagccaggattgcctatgtctgcactgaatgcggcacc
gaatacagcaaatggcagggacagtgcaccgaatgcagcacctggaattgcttaagccaa
atcaccctcggacatgcaggaacggtcaaaaacccaaccatgaagcacggcaattggaca
ggtcagctcgacccacccaagatcaccgcattgaaggacgtgcaacacagcgaacaagca
cgcatctccaccggcattggcgagtttgaccgcgtcctaggaggcggcctggtggcaggc
gcggtcgtcctgattggtggcgatccaggtatcggcaaatccacactgctactgcaagca
ctagcacggatggcaagcaccctacccacactgtatgtgacgggtgaagaatcgctgaca
caggtcgccgggcgtgcggtgcgcctggatctccccctggagggcttaaacgcactcgca
gaaaccggcattgaatcaatcctgcaacacgccagcagcgcacggccacgactgattgtc
gccgactcagtacagaccctatggaccgaaacactgaccgcagcacccggttcagtcagc
caagtacgagaaagcgccgcacagctagtgcgctacgccaaagaaaccggtacaaccgtg
ttcctggttggccatgtcaccaaagaaggcggcatcgccggcccacgcgtactggagcac
atggtagatgccgtgctgtatttcgaaggcgaaagcggtagccgtttccgtctcctgcgg
gcattcaaaaaccgctttggagcagtcaacgaactaggcgtctttgcgatgagcgaaaaa
ggcttgaaagaggtcgccaatccatcagccatttttttatccggcagaaacagcaaccaa
ccaggcagctgtgtgatggtcacccgtgaaggcacacgcccgctgatgatcgaagtacaa
gcactcgtcgatacctcgccactgtccaacccacgccgggttaccgtcgggctggaacaa
aatcggctagcaatgctgttagccgtgttgcatcgtcacggtaacgtcctcgttggtgac
caagacgtattcatcaacatcgttggcggcatccgcgttcaagagacagccgcagatcta
cctgtactactggcgatccggtcctcgttatgcaaccgggcgctgccggaaaagaccatc
gccttcggcgaagtaggtttatccggtgaaatccgcccggtccccaacggcgaagagcgc
ctcagagaagcagcaacacacggctttaagcgcgccatcgtgccaaaagccaacgcaccc
aagagtgccatcaaggacatgcagatcatcgccgtagaacgcctggatcaggcgctggaa
gcaagctattga
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