Xylella fastidiosa Hib4: XFHB_06460
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Entry
XFHB_06460 CDS
T04925
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
xfh
Xylella fastidiosa Hib4
Pathway
xfh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
XFHB_06460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xfh03400
]
XFHB_06460
DNA repair and recombination proteins [BR:
xfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
XFHB_06460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ALR07726
UniProt:
A0A1L2B488
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Position
1395766..1398387
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AA seq
873 aa
AA seq
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MQNIDMREKPEGGKGMAEHTPLMKQYFAAKAEYPDLLLFFRMGDFYELFHQDARKAARLL
DITLTQRGSSGGAPIPMAGVPVHAYEGYLARLIALGESVAICEQIGDPGLAKGLVERKVV
RIVTPGTITDEALLEERRDTLLMALSRSKNCYGLAWADLAGGRFLVNEVNSEEALEAELA
RLEPAELLLPDEDAWPEYLQQRNGVRRRPPWLFDADSGRRKLLAFFKLHDLSGFGIENNP
QATAAAGALLGYIEETQKQRLPHLTSITMETVGEAITMNAATRRHLELDTRVDGESRHTL
LGVLDSTVTPMGGRLLRRWLHRPLRLREVVRQRHAAVGSMIDSDLDNKLRETFRRLGDME
RILTRVALRSARPRDISTLRDSLSLLPRLRELLNASDSPRLRVLYAELGEHDSTASLLVK
AVAEQPPLKLTDGGVIASEYDVELDELRKLSNNADQFLIDLETRERESSGISTLKVGYNR
VHGYYIEISKGQADKAPVHYTRRQTLTNAERYITEELKAFEDKVLSARDRALVREKLLYE
QLLDTVGAQLEPLKRCAAALSELDVLVCFAERAQTLDWVRPELEHTSCLHIEGGRHPVVE
AVREQRFEPNDLDLHPERRMLVITGPNMGGKSTYMRQNALIVLLAYIGSYVPASRALIGP
IDRIMTRIGAGDDLARGQSTFMLEMTETSYILHHATAQSLVLMDEIGRGTSTYDGLALAD
AVARHLAHINRCYTLFATHYFELTALADETYEGGLSGIANVHFDAVEHSERLVFMHTVKD
GPANRSFGLQVAALAGLPAAAVAHARRRLAELEQRGRESHVSEITPLALDAPQQCSLFAS
APSAAQEALVALHPDELTPKQALEALYRLKALL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaacattgacatgagagaaaagcccgaaggtgggaagggcatggcagaacatacc
ccactgatgaagcaatacttcgccgccaaggctgagtatccagacttacttttgttcttc
cgtatgggagatttttacgagctatttcatcaagatgctcgcaaggcagcgcggttactc
gatatcacgttgactcagcggggtagttccggtggtgctccgatcccaatggccggtgta
cccgttcatgcctatgaaggctatttggcgcggctcattgccctgggtgaatccgttgcg
atttgcgaacaaattggagatccagggcttgctaaagggttggttgaacgtaaggtggta
cgcatcgtcactccaggtacgatcactgacgaggcgttactggaggagcgtcgcgacact
ctattgatggccttatcacgcagtaaaaactgttatggcttggcttgggctgacttagcc
ggtggccgtttcctggtgaacgaagtcaatagcgaggaggcattagaagccgaactcgca
cgtctggagccagctgagctgttactccctgacgaggatgcctggccagagtatctacag
cagcgcaacggtgtgcgtcgccgtcccccatggttgtttgatgctgacagcggccgccgt
aaattgctggcgtttttcaaactgcacgatttatccggcttcggtatcgaaaacaatcca
caagccactgcggcggcgggtgcactccttggctacattgaggaaacacagaagcagcgt
ctaccgcacctgacttcaattacgatggagactgttggcgaagcgattacgatgaacgct
gccacacgtcgccatttggagctggacacccgtgtggatggggagagccgccacactctg
cttggggtgctcgatagtacggtgaccccgatgggcggacggttgctgcggcggtggctg
catcggccgctgcggctgcgcgaggtggtaagacaacgtcatgctgccgtcgggagcatg
atcgatagcgatctcgataacaaactcagggagactttccgcaggcttggcgacatggag
cggattttgacccgcgtggcattgcgctcagcacgtccacgtgacatctccacattacgg
gatagcctcagcctcctgccacgtttacgtgagcttctcaatgcatcggattccccgcgc
ttgcgcgtgttgtacgccgagctgggtgagcatgacagcaccgcgtctttattggtaaaa
gccgttgcagaacagccacccttaaagctgactgatggcggtgtgatcgcctcagaatac
gatgtcgaattggacgaactgcgtaagctctccaacaatgcggatcagttcttgatcgat
cttgagacacgcgagcgtgaatccagtggtatttctacgctgaaagtgggttacaaccgc
gtgcatggttactatattgagatcagcaagggccaagccgacaaagcacccgtgcattac
actcggcgtcagacactgactaacgccgagcgctacatcacggaggaactgaaagcgttc
gaagacaaagtattatccgcacgtgatcgtgcgttggtgcgggaaaaattgttgtacgaa
cagctgctggacaccgtcggggcgcaactggaaccgctgaagcgttgtgccgctgcgtta
tctgagctagatgtactggtctgctttgctgagcgtgcacagacattggattgggtgcgt
ccggagttggagcacacatcatgcttgcatattgagggtggccgtcacccggttgtggaa
gcggtgcgtgaacagcgattcgagccgaatgaccttgatcttcaccctgagcgccgcatg
ttggttatcaccggccccaatatgggaggcaagtcgacctacatgcgccagaatgccttg
attgtcctgcttgcttatatcggcagctacgttccggccagccgcgcgctgattggaccg
attgaccgcatcatgacccgtatcggtgctggtgatgacctggcccgaggtcagtcgaca
tttatgcttgagatgacagagaccagctacattctgcaccatgcgaccgcgcagtcgctg
gtactgatggacgaaattggtcgggggacctcgacttacgatggcttggcgttggcggat
gcagtcgcacgccacttagctcatatcaaccgttgttatacgctgtttgctacgcattat
tttgagctgactgcactagccgacgaaacatatgagggaggtctgagcggtatcgctaac
gtgcatttcgatgctgtcgaacatagtgaacgcttggtcttcatgcacacagtgaaggat
ggcccggccaatcgcagttttggcctacaggtggctgctttggctggtctaccagctgcg
gccgtcgcacacgcacggcggcgtttagctgaactggagcagcgaggccgtgaaagtcat
gtttcagaaataacaccgctggcattggatgcaccgcagcagtgcagtttatttgcgtcg
gcgccctcagcagctcaggaagcattggttgcattgcatccggatgagttgacccctaag
caagcactagaagcgctttaccgactcaaagcgctgctataa
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