Xylella fastidiosa subsp. sandyi Ann-1: D934_03435
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Entry
D934_03435 CDS
T03318
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xfs
Xylella fastidiosa subsp. sandyi Ann-1
Pathway
xfs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xfs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D934_03435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xfs03021
]
D934_03435
03400 DNA repair and recombination proteins [BR:
xfs03400
]
D934_03435
Enzymes [BR:
xfs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D934_03435
Transcription machinery [BR:
xfs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D934_03435
DNA repair and recombination proteins [BR:
xfs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D934_03435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AIC09582
UniProt:
A0A060H9G9
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All DBs
Position
750762..751760
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AA seq
332 aa
AA seq
DB search
MTVTVSQVLRPRGPQIERLTENRAKVVLEPLGRGYAHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLEVLLNLKDVAIRIHSGDTATLSLFKQGAGVVTAADIKTDHN
VEIINDGHVICHLTKDTTINMRLKIERGFGYQPAVVRRRPDDENRTIGRLILDASFSPVR
RVAYVVEAARVEQRTDLDKLIIDIETNGTIDAEEALRTAADILTDQLSVFGNFTHRDRGT
VKPASSGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLGQRGLGLGVKLENWPPPGVSQYGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgtcagccaggttctgcgtcctcgaggtccgcagatcgaacgtcttaca
gaaaaccgtgccaaggttgtacttgagcctttgggtcgcgggtatgctcatacattaggt
aatgcattgcgtcgtgtcctgctttcttcgattccgggattcgcgattacagaagtggaa
attgatggtgtgttgcatgagtacacaacagtcgaaggtttgcaggaagatgtgcttgaa
gttttgttaaatcttaaggatgtggcgatccgtatacatagtggtgatactgctactctt
tctttatttaaacaaggagcaggagtggtgactgctgcggatattaagacggaccataat
gttgaaattatcaatgatggtcacgtcatatgtcatttgactaaagacactacaattaat
atgcgtttgaaaattgagcgtggttttggttatcagcctgctgttgtccgtcgtcgtcct
gatgatgaaaatagaaccattggtcgtttgattttggatgcctcgttttctccggttcgt
cgtgttgcttatgtcgttgaggcagcacgtgtagagcaacgtactgatttggataaactc
attattgacatcgaaacaaatggtacgatagacgctgaagaagctcttcgtactgctgct
gatattcttactgatcagctgtcggtgtttggtaattttacgcaccgtgatcgtggtaca
gtcaaacctgctagtagtggtgtggatcctgtgctgcttcgtccaattgatgatttggag
ttgacggtgcgttctgctaattgtttgaaggcggagagtatttattatattggtgatctt
atccaaaaaacagaggttgagttgcttaagactcccaatttaggtaagaagtcgcttact
gagattaaagaagttcttggccaacgtggtttaggacttggagtgaagttggagaattgg
ccgcctccaggtgtttctcaatatggaatgcttggttaa
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