Xylella fastidiosa Temecula1: PD_1869
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Entry
PD_1869 CDS
T00113
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
xft
Xylella fastidiosa Temecula1
Pathway
xft00300
Lysine biosynthesis
xft00550
Peptidoglycan biosynthesis
xft01100
Metabolic pathways
xft01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
xft00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PD_1869 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PD_1869 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
PD_1869 (murF)
Enzymes [BR:
xft01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
PD_1869 (murF)
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LSDAT_prok
MadL
Motif
Other DBs
NCBI-ProteinID:
AAO29701
UniProt:
Q87AF6
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Position
complement(2196597..2198003)
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AA seq
468 aa
AA seq
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MRSMPLSLIAYWTGGYLHGEDVRVCAIGHDTRALDVGVLYVALRGQRFDAHLFCAEAVAR
GAAGVLVDHVLPELDVPQVVVADTERALAAIASALQRDRTSFVLALTGSNGKTSVKAMLV
SILEHAAAQSSTVVYASSGNCNNEIGLPLAVIAAPDNADFAVYEMGAGKLGDIGYLTDIV
TPDVALVNNIAPAHLERMGSLLGVARTKGEIYAALRPGGTAVINMDDAFALWFEQQCVPA
GCAVLRFGLQATADVTAYSLQFSEDSVRFVLVTPQGEVPVCLALSGRHNVCNALAAAAMA
LVAGIPLSQIAAGLGLARSVAGRQVAHALPGGAVLIDDSYNANPGSLDVAIDTLTAASGP
GWLVLGDMLELGLEGVALHAAAGRRARQAKVARLYALGELSAVAAREFGEGGHVFADHDA
LAAVLWDDLMHVPGGVPPRVLVKGSRGSAMDKIVGALLSSAEGVAHVV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagatctatgccactttcgttaattgcgtactggaccggtggttatctgcacggtgag
gatgtcagggtgtgtgcaattggtcatgacacccgtgcgctggatgttggcgtgttgtat
gtggcgttgcgaggccagcgtttcgatgcgcatctattctgcgccgaagcggtggcacgt
ggtgcggcgggggtattggttgatcacgtcttgccagagttggatgttcctcaggtcgtt
gtggccgatactgagcgcgcgcttgcggcgattgcttcagccttgcagcgtgaccggaca
tcttttgtgttggcattgactgggtccaatggaaaaaccagtgttaaggcaatgcttgta
tccattttggagcatgctgcggcacagagtagtacggtggtctatgcgagttctggtaac
tgcaacaatgagattggcctgccgttggcagtgattgccgcgcccgataatgccgatttt
gcggtgtatgagatgggtgcgggcaagttgggcgacatcggttatttgactgacatcgtt
acgccggatgtggcgttggttaataacatcgcaccggcgcacttggagcgcatggggagc
ttgcttggtgtggcgcgtaccaaaggtgagatctatgccgcgttgcggcctggtggtact
gctgtgatcaatatggatgatgcgtttgctttgtggtttgagcagcagtgtgttccggct
ggttgtgctgtgttgcggttcggtttgcaggcaactgctgacgttactgcgtatagcctg
caattcagtgaggacagtgtgcgttttgtacttgtgacgccacagggggaggtgccggtg
tgcttggcgctgtctgggcgtcacaatgtgtgtaatgcgctggcagcggcagcaatggcg
ttggttgctggtattcctttgtcgcagattgcggctggtcttggtttggctcggtcggtg
gccggtcgccaagttgcgcatgctttacccggtggtgcggtattgattgatgatagttac
aacgccaatcctgggtcgctggatgtggcaatcgatacgttgacggctgcttccggccca
ggatggttggtgcttggcgatatgctcgagcttggtttggagggggtggcgctgcatgcc
gctgctggacgtcgtgcacgtcaagccaaagtagcccgtttatatgcactgggtgagttg
agtgcagttgcagcgcgggagtttggtgagggtggacatgtgtttgccgatcatgatgcg
ttggctgcggtgttgtgggatgacttgatgcatgtaccaggtggggtgccgccgcgggtg
cttgtgaaggggtcgcggggtagtgcgatggacaaaattgtgggcgctctgttgtcgagt
gcggagggcgtagcgcatgttgtttga
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