Xanthomonas hortorum pv. gardneri: BI317_19445
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Entry
BI317_19445 CDS
T04668
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
xga
Xanthomonas hortorum pv. gardneri
Pathway
xga00540
Lipopolysaccharide biosynthesis
xga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
BI317_19445
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xga01005
]
BI317_19445
Enzymes [BR:
xga01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
BI317_19445
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
BI317_19445
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
BI317_19445
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
BI317_19445
Lipopolysaccharide biosynthesis proteins [BR:
xga01005
]
Lipid A
BI317_19445
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_1_2
Glyco_trans_4_4
TetR_C_22
Glycos_transf_1
Motif
Other DBs
NCBI-ProteinID:
APP87082
LinkDB
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Position
complement(4257247..4258563)
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AA seq
438 aa
AA seq
DB search
MRKDPIEWLLRGLYSALLYLLLPVTVYHLVWRGFRVREYFNRWNERYASYTHACGRPRVW
VHAVSVGEVNAAAPLVNALRAQRPDIRWVITTITPTGSERVRAVWGDAVDHVYLPYDVPG
SVGRFLEHFRPRLALILETELWPNMLFGCRDRNIPVYILNARLSARSLRGYRVLAPLISR
ALRTVTCVAAQSHDDAERFLTLGARADQVIALGNLKFDIAAPAHLQALVAQFHTHVPATR
PVWIAASTHEGEEAAVADIHARLLLQFPDLLMLWAPRHPERFPKVEALARERGWSVSTRK
TQQWPQARDKVFVIDTLGELMSFYACAQVAFVGGSLQPIGGHNLLEPAAVGTPAVTGPHL
HNFSEISRRMREADAVAICEDADCVYRDLARLLGAPAQREAMAAAGLALVANGKGAVART
LVQIAPDLPPVVGDGVAS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagacccgatcgaatggctgttgcgcgggctgtactcggcgctgttgtacctg
ttgctgccggtgacggtgtaccacctggtgtggcgcgggtttcgcgtgcgcgaatacttc
aaccgctggaacgagcgttatgcgtcctacacgcatgcctgcggtcgcccgcgcgtgtgg
gtgcatgcggtatcggtgggcgaggtcaatgccgccgcgccgctggtcaacgccttgcgc
gcgcagcgtccggatatccgttgggtcatcaccaccatcacccccaccggctccgagcgc
gtgcgcgcggtgtggggcgatgcggtggaccatgtgtatctgccctacgacgtgcccggc
agcgtgggccggttcctggagcatttccgcccgcggctggcgttgattctggagaccgag
ctgtggccgaacatgttgttcggttgccgcgaccgcaacattccggtgtacatcctcaac
gcgcggttgtcggcgcgttcgctgcgcggctatcgtgtgctggcacccttgatcagccgg
gcactgcgcaccgtcacctgcgtggcagcgcaatcgcacgacgatgccgagcgtttcctc
acgctgggcgcgcgcgccgatcaggtgatcgcgctgggcaatctcaaattcgatatcgcc
gcgcccgcacacttgcaggccctggtcgcgcagtttcatacgcacgtgccggcaacgcga
ccggtgtggattgccgccagcacacacgaaggcgaggaggcggccgtggccgacatccat
gcgcgcctgctgctgcaatttcctgatctattgatgttgtgggcgccgcggcatcccgag
cgctttcccaaggtcgaggcgctggcgcgcgaacgtggttggtccgtgtccacacgcaag
acccagcagtggccgcaggcgcgcgacaaggtattcgtcatcgataccttgggcgagctg
atgagtttctacgcctgcgcgcaggtcgccttcgtcggcggcagtctgcagccgatcggc
gggcacaacctgctcgaaccggcagcggtcggcacgccggcagtcaccggcccgcatctg
cataatttctcggagatctcgcggcgcatgcgcgaggccgatgcggtcgccatctgcgag
gacgccgattgcgtgtatcgcgatcttgcgcgcttgcttggcgctccggcccagcgcgag
gcaatggcggctgcaggattggcgctagttgccaacggcaagggcgcggtagcgcgcacg
ctggtacagatcgcgccggatctgccgccggtggttggtgatggtgtggcgtcctga
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