Xiphias gladius (swordfish): 120784624
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Entry
120784624 CDS
T07311
Symbol
trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120784624 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xgl03036
]
120784624 (trip13)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
120784624 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_18
Viral_helicase1
AAA_14
AAA_24
AAA_25
TIP49
NPHP3_N
AAA_5
TsaE
AAA_28
AAA_17
RNA_helicase
AAA_7
NACHT
RuvB_N
ATPase_2
Cytidylate_kin
AAA_33
IstB_IS21
AAA_30
ABC_tran
bpMoxR
AAA_11
DUF815
ATPase
SLFN-g3_helicase
AAA_19
NB-ARC
Mg_chelatase
Rad17
DUF6393
PduV-EutP
NRBF2
Sigma54_activat
nSTAND1
PhoH
nSTAND6
NTPase_1
AAA_3
Motif
Other DBs
NCBI-GeneID:
120784624
NCBI-ProteinID:
XP_039974502
LinkDB
All DBs
Position
LG22:complement(15711820..15718004)
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AA seq
441 aa
AA seq
DB search
MSTAALVNETNQLDNVDVVSFTGMEVGNRKQNIHVEVHVKSHSTAKLSEVKINVLALLNR
HSMVFGNYRWTEFDEDFLKKHVESVAIVDIEEMITQPLDLNSCSVSVHIFTLNEDGPSTL
TLEDDEELSAANHWLLPAAEFHGIWESLVYESGVKTQLLDYVTTTIYFSDKNVDSNLISW
NRVVLLHGPPGTGKTSLCKALAQKLSIRLSSRYSYGQFVEINSHSLFSKWFSESGKLVTK
MFQKIQQLIDDKDALVFVLIDEVESLTAARNACQAGTEPSDAIRVVNSVLTQLDQIKRHS
NVVILTTSNVTEKIDLAFVDRADIKQYIGPPSEKGIYNIYLSCLEELMKCQIIYPRQQLF
TMFELETMGFAKSEVSEHSLNLRDIALKSKGLSGRALRKLPFLAHALFVRSPTVTLERFL
EAMDRAVDKQREEKANLVNGV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgcagctctggtcaatgaaactaatcagctcgacaacgtagacgttgtaagt
tttacaggaatggaggtgggaaaccggaaacaaaacatccatgtggaggtccacgttaaa
tctcacagcacagctaaactgtctgaggtgaagataaacgttctggctctactgaatcgc
cacagcatggtttttggaaactacagatggacagagtttgatgaagactttctgaagaaa
catgtggagtctgtggctatagttgatattgaggaaatgataacacagccccttgatttg
aacagctgctctgtctctgttcacatcttcactctgaatgaggatggacccagcacgctc
actttggaagacgatgaggagctttcagcagcaaatcactggttgttgccagcagcggaa
tttcatgggatttgggagagcctggtatatgagagtggtgtcaaaacccagctcctggat
tatgtcacaacaacaatttacttctcagacaaaaatgtcgacagtaacctgatatcgtgg
aaccgcgttgtgctgctccacggacccccaggcacagggaaaacgtcactgtgcaaagct
cttgcccagaagttgtcaatcagactgtcgagtcggtattcttatggccagtttgtcgag
ataaacagccacagcttgttctcaaagtggttctcagagagtggcaagctggtcacgaag
atgtttcaaaagatccaacaactgattgatgacaaagatgctcttgtgtttgttctgatt
gatgaggtggagagtctgacagcagctaggaatgcctgccaggcgggaacagagccttct
gatgccattcgagtggtcaactctgttctcactcaactggaccagattaaacgacattca
aacgttgtgatcctgacgacctccaatgtgacagaaaagattgacttggcatttgtggac
agagccgatatcaagcagtacattggacccccatctgagaagggcatctacaacatctac
ctctcctgcctcgaggagctgatgaagtgccagataatctacccccggcagcagctgttt
accatgtttgagcttgagacgatggggtttgctaagagtgaggtgtctgaacacagtctg
aacctgagggacattgctctaaaaagcaaaggtttgagtggaagagcactcaggaagtta
ccatttctagcccatgcactgtttgtgaggtcaccgacagtgactctcgagaggtttctg
gaggctatggaccgagcagtggataaacagagggaggaaaaagctaacctggtcaacggt
gtctga
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