Xiphias gladius (swordfish): 120784684
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Entry
120784684 CDS
T07311
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120784684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xgl04121
]
120784684
Enzymes [BR:
xgl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120784684
Ubiquitin system [BR:
xgl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120784684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-C2H2_AcuF
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
120784684
NCBI-ProteinID:
XP_039974609
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All DBs
Position
LG22:complement(15624762..15627417)
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AA seq
415 aa
AA seq
DB search
MAMSLRPRSCGSLSPEGILREIQINLLECKVCFEKFCTQQRERRPQNLSCGHVLCLECIT
ALSHPLLRKLECPFCRQLCSVDSTSHCQVLSDLQELLLSRSPTSSAPPHRGAKGGFSLAA
GLISTALHLNTAFGGWGSLINPTGIAVLGSSGAIVVVHDGEKSVVVFSPQGRKLHSFGRR
GKASREICYPVDVVVTPCGYVVVTDAGDKAVKVFTSRGNHVLTVKDSFQMPWGVDTNSCG
HLLVSDVQAGTLFHIKVDYSHGVTLEHHISISDLQQPKAVACCRVTGNTAVMEHLTADTH
PPERQHHTRLKVFTKDFHILYQTDSFSLSLQSTVRLNMSGVAFDRNGDVVVTDSKQGMIW
ILGKFQDGPVLTPLVGDHLIRPVGLVSLNNMLIILDSGEHAVKIYSAKSGTAPMI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgagtcttcgtccacgaagttgtgggagcctgagtcctgaggggattctgaga
gagatccagatcaatttgctggagtgtaaagtctgcttcgagaagttctgcactcagcag
agggagcgcagaccacagaacctttcctgtggccatgtactctgtctggaatgcatcaca
gctctgtcccaccctctcctgaggaagctggagtgcccgttctgtcgacagctgtgcagc
gttgacagcacctcccactgccaggttcttagtgacctccaggagctgctgttgtcccgg
agtcccacatcctctgctcctcctcacaggggggcaaaaggaggctttagtttggctgca
ggtctgatatccacagctctgcacctcaacacagcttttggcggttgggggagtctgatc
aaccccactgggatagctgttttagggtcctcaggggcaatagtggtggtgcatgatgga
gagaagagcgtggtggtgttcagtccacagggcaggaagctgcacagttttgggcgaaga
ggaaaagccagtagagagatctgttacccagtggatgtggtggtgactccctgtggatac
gtggtggtgactgatgcaggggataaagctgtgaaggttttcacctccagagggaaccac
gtgttgacggtcaaggattccttccagatgccctggggtgtggacacaaacagctgtggg
cacctcctcgtctcagacgtccaggctggcacactgtttcatataaaggtggactatagt
catggtgttactctggagcatcatatatccatttctgacctccagcaaccaaaagcagtg
gcctgctgtcgagtgaccgggaacactgcagtgatggagcacttaactgctgacacacat
ccaccagagaggcagcaccacacaaggctgaaagtgtttaccaaagacttccacatcctt
tatcagacagacagtttcagcctgagcctgcagtccacagtgaggctgaacatgtccggt
gtggcatttgacagaaatggagatgtggttgtgacagactctaaacaggggatgatttgg
attttagggaaattccaggatggcccggtcctgactcctcttgtcggggaccaccttatc
cgcccagttggactggtgtcactgaacaacatgctcatcattcttgacagtggagaacat
gcagtaaagatttattctgctaaatctggtacagcacccatgatatag
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