KEGG   Xiphias gladius (swordfish): 120788582
Entry
120788582         CDS       T07311                                 
Symbol
sf3b6
Name
(RefSeq) splicing factor 3B subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
xgl  Xiphias gladius (swordfish)
Pathway
xgl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:xgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120788582 (sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xgl03041]
    120788582 (sf3b6)
Spliceosome [BR:xgl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120788582 (sf3b6)
 Complex B
    120788582 (sf3b6)
 Complex C
   U2 SnRNP specific factors
    120788582 (sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 120788582
NCBI-ProteinID: XP_039980391
LinkDB
Position
LG4:20083391..20088853
AA seq 125 aa
MAMQAAKRANIRLPPEVNRILYIRNLPYKITAEEMYDIFGKYGPIRQIRTGNTPETRGTA
YVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYNANRAFQKMDTKKKEEQLKLLKEKYGIN
TDPPK
NT seq 378 nt   +upstreamnt  +downstreamnt
atggccatgcaagcagcgaaacgtgctaatatacgattacctcctgaggtgaacagaatc
ctgtacataaggaaccttccttataaaatcacagctgaggaaatgtacgatatctttggg
aaatatggaccaatacgtcaaatcagaacagggaacacacctgaaacaagaggaacagcc
tatgtagtgtatgaagacatctttgatgccaagaacgcctgtgaccacctgtcaggcttc
aatgtctgcaaccgttacctggtggttctctactacaatgcaaacagagctttccagaag
atggacacaaagaagaaagaggagcagctgaaacttctaaaagagaaatatggcatcaac
acagaccctccaaagtag

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