Xiphias gladius (swordfish): 120790239
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Entry
120790239 CDS
T07311
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120790239 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xgl03032
]
120790239 (pola1)
Enzymes [BR:
xgl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120790239 (pola1)
DNA replication proteins [BR:
xgl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
120790239 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DUF1744
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
120790239
NCBI-ProteinID:
XP_039983545
LinkDB
All DBs
Position
LG5:complement(11228092..11285331)
Genome browser
AA seq
1480 aa
AA seq
DB search
MAPVSNADKDMDSPDGDVYVFSEDGGDACSLARSRARREKREKVGRKSALEQLKKAKMGE
KFKYELEEFTSVYEVVDEEQYSKMVRERQEDDWIIDDDGTGYVEDGREIFDDLDDDVVEN
TKGKASAKGADSKKTVKKSAVAKPNTIKSLFMNSNVKRPAEKDVDLSKDDLLGDILQDLH
SEEPTSLAPPPVVTLKKRRVLGSPMNSFSIKPQMPKESPSAMGLKAKGIHPPPSDPTPRP
SAHPPPSTSALPLEKQRAKLEEPDEEEVNDALVFDGVDFDEPMEVGLEEEKPSVTEDAEP
ESKVSAIPAVKVEPKAEPWDPVLLSSRIGSSWGQEEEGGVSDAPAEVQVDSSHLPLVEGA
DGEQVFRFYWLDAFEDPYSQPGVVYLFGKVWIESAKSHVSCCVTVKNIERTIYFLPREYK
VNPKTGEVSETPVGMMDVYQEFSDLSEKFKIMKFKSKKVEKNYSFEIPDVPSQCEYLEVR
YSAEFPALPSGFMGSTFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKTPQLISQPVSWCKV
EALALRSDLVTVVKDLSPPPLTIMSISLKTIQNPKTHHNEIVSLAALIHYQYHMDKAPPQ
PPYQTHFCVVSKPADCIFPYDFKEAVRKKNGKVEIASTERTLLGFFLAKMHKIDPDVLVG
HDIFGFDLEVLLQRINVCRVPHWSKTGRLRRANMPKLGGRGSFAERSATCGRLVCDVKIS
AKELIRCKSYHLTELAAQVLKTERVTVSQEDIKNLYSDSPHLLYLLELTWTDAKLILQIM
CELNVLPLALQITNIAGNVMSRTLMGGRSERNEFLLLHAFHEKNYIVPDKPSFKKAQLEM
VEGEDVDAGKGKRKKAAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQ
REAHNTQKKNEEDGLEEIPEIPDSSLEMGILPKEIRKLVERRRQVKQLMKQQDINPDLYL
QYDIRQKALKLTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKGMVQKMNLEVIY
GDTDSIMINTNSRSLEEVYKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVV
EHHGEGQFSVRQELKGLDIVRRDWCDLAKECGNYVIGQILSDQSRDVIVENIQKHLVEVG
EKVASGAIPLNQYEIHKSLTKEPQDYPDKKSLPHVHVALWINSQGGRHVKAGDTVSYIIC
KDGSVLPASQRAYALEQLQKQEGLSLDNQYYLAQQIHPVVSRICDPIEGIDNVLIATWLG
LDPSQFRAQQQYQREEEADGMLGAPVQLTDEERYNDCERFTFTCPQCGTNNIYDSVFEGA
GLKLEPSLMRCCHIPCASRPIDYAVNISNKLLLDIRRHIKKYYSGWLLCEDQACQNRTRR
LPIAFSRHGPICPACTRATLRPEYSEKAMYNQLCFYRFIFDWDYAVAKVLQVDERNRVSR
FKVEKEVYRRLKEVPEKAVATSGYSEINLAKLFQAFSSLK
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggctccggtatcaaacgcagacaaagacatggacagtccggacggcgatgtgtacgta
ttctcagaggatggaggtgatgcctgcagtctggcaaggtctcgcgccagaagggagaag
agggagaaggtgggaaggaagtccgcactggaacagctcaagaaagccaagatgggggag
aagttcaaatatgaattggaagaatttaccagtgtgtatgaggtggtggacgaggagcag
tactcgaagatggtacgagagcgacaagaggatgactggattattgatgatgatggaaca
ggatatgtggaagatggacgagaaatctttgacgatttggatgatgatgtagtagaaaac
accaaaggaaaagcgagtgctaaaggagcagactcaaagaaaactgtgaaaaaatctgct
gtagccaagcccaacaccattaagagcctcttcatgaacagtaatgtcaagaggcctgct
gagaaagacgtggacctgtccaaagatgacttattaggagatatcttacaggacctgcac
tctgaggaaccgacttctttggctcctccgccagtggtcactctgaagaagaggagggtg
cttgggtcacccatgaattcattctccatcaaacctcaaatgccaaaggagtcaccctca
gctatggggttaaaggccaaagggatccatccgccaccttctgacccaacccccaggcca
tcagcccatcctcctccctccacatctgctcttcctttggaaaagcagagggcaaaactg
gaggagccggatgaagaggaagtgaatgacgctctggtgtttgatggggtggactttgat
gagccgatggaggttggacttgaggaggagaagccttcagttacagaggatgctgagcct
gaatctaaagtatcagcaatacctgcagttaaagtggagcccaaagcagagccttgggat
cctgtcctcttgtccagcaggatcggaagctcctggggtcaagaggaggagggcggagtc
agtgatgctccggcagaggtacaggtcgactccagccatctcccactagtagagggggca
gacggggagcaagttttccgcttctattggttggatgcttttgaagacccgtacagccag
ccaggtgttgtgtacctgtttggaaaagtgtggatcgagtctgcaaagtctcatgtcagc
tgctgtgttactgtcaagaacattgagcggacgatctacttcctgcctcgtgaatataaa
gtgaaccccaagactggggaagtatcagagactcctgtagggatgatggatgtttaccaa
gagttcagtgacctctctgagaagttcaagatcatgaagttcaagtccaagaaagtggag
aagaattattcttttgaaattcctgatgtgcccagtcagtgcgagtacctggaagtcaga
tattctgctgagttccctgccctgccttctggctttatggggtcaaccttttcccacatt
tttggtaccaacacctccagtctggagcacttcctcctcagcaggaagatcaaagggcct
tgctggctagacatcaagacaccacagctgatcagccaaccggtgagctggtgtaaggtg
gaggctcttgccctgagaagtgacttagtcactgtggttaaagacctgtcacctccaccc
ctcactatcatgtccatcagcctcaagactatccagaaccccaagacacaccacaacgag
attgtgtccctggctgcacttatccactatcagtatcatatggataaagctccacctcaa
cctccctaccagacgcacttctgtgtggtcagtaaaccagctgactgtattttcccgtat
gacttcaaagaggctgtgaggaagaaaaatgggaaggtggagatagcttctacagagcgc
actctacttggattcttcttggctaagatgcacaagatcgaccctgatgtgctggtgggc
cacgacatctttggttttgacctggaagtacttctgcagaggatcaatgtgtgcagggtt
ccacattggtctaagactggacgccttaggagggccaatatgcccaaattagggggacgt
gggtcctttgcagagaggagtgcaacctgtggccgtctggtgtgcgatgtgaagatctca
gccaaggagcttattcgttgtaaaagttatcatctgactgagctggctgcacaggtgctg
aagacagagagagtcacagtctcccaggaagacatcaaaaatctctacagtgactctcct
cacctgctctacctgttggagttgacatggacagatgccaagctgatcctccagatcatg
tgtgagctcaacgtgttgccgctggccctgcagataaccaacatcgcagggaatgttatg
tctcgtactctgatgggtggtcgctctgagaggaatgagttcctgttactccatgccttc
catgagaaaaattacattgtccctgacaaaccctccttcaaaaaggcccagctggagatg
gtcgagggagaagatgtggatgcagggaaaggcaagcgaaagaaggcggcagcttatgct
ggaggtctggtgctggatcctaaagttggtttctatgataagtttgtgctgctgcttgac
ttcaacagcctgtatccatcaatcatccaggagttcaacatctgtttcaccactgtacag
agggaggctcacaacacacagaaaaagaatgaggaggacgggctagaggagattcccgag
attccagattccagcctggaaatggggatcctgccgaaggaaatcaggaagctagttgag
cggcgtagacaagtcaaacagcttatgaaacagcaagacatcaacccggacctttacctg
cagtatgacatccgtcagaaggctctgaagctgactgctaacagtatgtatggctgcctc
ggattcagctacagccgtttctatgccaagccacttgctgcccttgtcacacacaagggt
agagagattctgatgcacaccaaaggcatggttcagaagatgaatctggaagtaatctac
ggagatacagactccattatgatcaacaccaacagcaggtctctggaggaagtctataaa
cttggcaataaggtgaaggcagaagtaaacaagctgtacaaactgctggagattgacatc
gatggtgtgtttaagtcgcttttacttttgaagaagaagaaatatgcagctttggttgtg
gagcatcatggcgaaggacagttcagcgttaggcaggagcttaaaggcttggacatcgtc
cgcagagattggtgtgacctggccaaggaatgtggcaactatgtgattggtcagatcttg
tcggaccagagtcgtgatgtaattgtggagaacattcagaaacacctggtggaggtggga
gagaaggtagcaagtggagccatacctctcaaccagtatgagatacacaagtcactgact
aaggaacctcaggactatccagacaaaaagagcctccctcacgtccatgtggctctgtgg
atcaactctcagggcggtcgccatgtcaaagctggagatacagtctcttacattatctgt
aaggatggctctgtgctgccagccagtcagagagcctatgctttagagcagctccagaag
caggagggtcttagtctggacaatcagtactacctggcccagcagatccaccctgtggtg
tctcgcatctgtgatcccatcgagggcattgacaacgtgctcatagccacttggctcggt
ctggaccccagccagttccgggctcagcagcagtaccagagagaggaggaggctgatggc
atgctgggagctccggtccaattgactgatgaagagcgctacaacgactgtgagaggttc
actttcacatgccctcaatgtggcactaacaacatctacgacagcgtctttgaaggagct
ggtttaaagttggagcccagcttaatgcgatgttgtcacatcccctgtgcgagccgcccc
attgactacgctgttaacatcagcaacaaactgctacttgacatccgtcgccacatcaaa
aaatactactctggctggttgctgtgtgaggaccaggcctgtcagaacagaaccagacgt
ttgcccattgctttctcccgccacggacctatctgccctgcctgcaccagggcaactctc
agacctgagtattctgaaaaggccatgtacaaccagctctgcttctacaggttcatcttt
gattgggactatgctgttgccaaagtactacaggttgatgagagaaatcgtgttagccgg
ttcaaagtggaaaaggaagtgtatcgaaggctgaaggaagtgccagagaaagctgtggcc
accagtggctactcagagattaacctggccaaacttttccaggccttctcttccctcaag
taa
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