Xiphias gladius (swordfish): 120794082
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Entry
120794082 CDS
T07311
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03266
Virion - Herpesvirus
xgl04145
Phagosome
xgl04148
Efferocytosis
xgl04510
Focal adhesion
xgl04512
ECM-receptor interaction
xgl04810
Regulation of actin cytoskeleton
xgl04820
Cytoskeleton in muscle cells
xgl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120794082
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120794082
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120794082
04148 Efferocytosis
120794082
09144 Cellular community - eukaryotes
04510 Focal adhesion
120794082
09142 Cell motility
04820 Cytoskeleton in muscle cells
120794082
04810 Regulation of actin cytoskeleton
120794082
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120794082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xgl04131
]
120794082
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xgl04147
]
120794082
04515 Cell adhesion molecules [BR:
xgl04515
]
120794082
04090 CD molecules [BR:
xgl04090
]
120794082
Membrane trafficking [BR:
xgl04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
120794082
Exosome [BR:
xgl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120794082
Cell adhesion molecules [BR:
xgl04515
]
Integrins
Integrin beta subunits
120794082
CD molecules [BR:
xgl04090
]
Proteins
120794082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
PSI_integrin
I-EGF_1
EGF_2
BNR_6
Motif
Other DBs
NCBI-GeneID:
120794082
NCBI-ProteinID:
XP_039990656
LinkDB
All DBs
Position
LG9:complement(10847321..10865686)
Genome browser
AA seq
795 aa
AA seq
DB search
MGALPPQTLLWMCVFVFTGITEVCASNVCTSRGASTCKQCLAVHPSCAWCFQEDFGQGVA
SSSRCDLKSNLVAAGCAPSALESPTSKLQVIEDRPLSNKAAGATQNVTQIKPQRLHITLR
PDDAQRFTVKVRQVDDYPVDLYYLMDLSYSMNDDLFRLRTLGKGLAEAMNRTTSNLRMGF
GAFVDKPVSPYMYISPKEAVENPCYSINTTCLPQFGYKHVLSLTEEVGRFTEEVKKQMVS
RNRDAPEGGFDAIIQAAVCKEQIGWRPGASHLLIFTSDAKTHVALDGRLAGIIQPNDGQC
HLNSDNIYSMSTTMDYPSLALITEKMSENNINLIFAVTNPVVPLYQNYSELIPGTTVGTL
SNDSGNVIQLILKAYAKIRSKVELELQGVPEELSLSFNATCLNGEVIPGLKSCSGLKIGD
TVSFSVEARARGCPKQKKKTFIIKPVGFKDSLSITVTFECDCKCQAKAQPNSPICNHGNG
TYECGICLCHPGRLGPHCECAEGDYNPTEQDHCSGPAGSGGLHSAVCSGRGDCVCGQCVC
HSSDFGKVWGKLCECDDFNCLRYKGELCSGHGICNCGFCQCAPDWQGENCNCSRRTDTCM
SHLGLLCSGRGQCVCGVCECTQPGAYGATCDKCPTCPDACTMKKECVECKHFKRGKLFED
KTCSRICKDEIELVDEIVLNDTNAVNCTYKDEDDCVERFQYYEDTGGKSILFVVKEPDCP
TGPDILVVLLSVAGAILFLGLAALLIWKLLVTIHDRREFAKFEEERARAKWDTGHNPLYK
GATSTFTNITYRGKD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcgctcccgccgcagacgctactatggatgtgtgttttcgtctttactggaata
acagaggtttgcgcttcaaacgtctgcacctccagaggagccagcacatgcaagcaatgt
ctggctgtgcaccccagctgtgcgtggtgcttccaggaggactttggccagggagttgcc
agttcttcccgctgtgacctgaagagtaacctggtggcagcgggctgtgctccgtcagct
ctggagtctccaaccagcaaactgcaggtgatcgaggaccggccactcagcaacaaggca
gcgggggccacacaaaacgtcactcagatcaaaccccagagactccacattaccctcagg
ccagatgatgctcagcgcttcacagtgaaggtgcgtcaggtggacgactaccctgttgat
ctctactacctcatggacctctcctactccatgaatgacgacctcttccgcctgaggacg
ctgggcaaaggcctggccgaggccatgaaccgcaccaccagcaacctccgcatgggcttt
ggggcttttgtggacaagccggtctcgccttacatgtacatctcccccaaagaggctgtg
gagaacccctgctacagcattaacacgacatgtctgccccagtttggctacaaacacgtt
ctgtctctgacggaggaagtaggccgcttcacagaggaagtgaagaagcagatggtgtcc
aggaaccgagatgccccagagggaggctttgatgccatcatccaggctgcagtgtgcaag
gagcagatcggctggcgtcctggtgcttcccatctcctgatcttcacctcggatgcaaag
actcacgtggctctggatggtcgtctagccggaatcattcaacccaatgatgggcagtgc
cacctcaactctgacaatatttacagcatgtctaccaccatggattacccatctcttgcc
ctgatcacagagaagatgtcggagaacaatatcaacctcatctttgctgtcaccaatcct
gtggttcctctgtaccagaactatagcgagctgattcctggcaccacagtaggaacactg
tccaatgactcgggcaacgtcattcagctcatactgaaggcctacgctaaaatccgttcc
aaagtggagctggagctccagggcgtcccagaggagctgtccttgtcctttaatgccacc
tgtctgaatggagaggtcatccctggccttaagtcctgctctggactcaaaataggagat
acggtctctttcagtgtggaggccagggctcgtggttgccccaaacaaaagaagaaaacc
ttcattattaagcctgtgggcttcaaggactccctctccatcaccgtcacctttgagtgc
gactgcaagtgccaggccaaagcccagcccaacagccccatttgcaaccacggcaacggc
acctatgagtgtggcatctgcctgtgccacccgggtcgcctggggccgcactgtgagtgt
gcagagggcgactataatcccacagagcaagaccactgcagtggacccgcaggctctgga
gggctgcactctgccgtctgcagcggccgcggagactgtgtgtgcggccagtgtgtgtgc
cacagcagtgactttgggaaagtctggggcaagctgtgcgagtgtgatgacttcaattgc
ctgcgctacaagggggaactctgctcaggccatggtatctgtaactgtggcttctgccag
tgtgcaccggactggcagggtgagaactgtaactgctccagacgtactgacacctgtatg
tcccacctgggtctgctgtgcagtggtaggggccagtgtgtgtgcggggtctgtgagtgc
acccaacccggtgcgtacggggccacgtgtgacaagtgccccacctgccctgacgcctgt
accatgaagaaggagtgtgtggagtgtaagcacttcaagaggggcaagctgtttgaggac
aagacctgctctcgaatttgcaaggatgaaattgagctagtggatgaaatagtgctcaat
gatacaaatgctgtaaattgcacttacaaagatgaggatgattgtgtggagcgtttccag
tactatgaagacaccggtggcaagtccatcttgtttgtcgtcaaagagccagactgcccc
acgggtccagacattttggttgtgcttctgtcagtggcaggagccatcttgttcctcggc
ctggcggctctgcttatctggaaactgctggtcaccatccatgacagacgggagttcgcc
aaatttgaggaagaacgtgctcgtgccaagtgggacacgggccacaatcctctctacaaa
ggagccacgtctaccttcacaaacatcacatacagaggaaaagactga
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