Xiphias gladius (swordfish): 120797166
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Entry
120797166 CDS
T07311
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04141
Protein processing in endoplasmic reticulum
xgl04210
Apoptosis
xgl04217
Necroptosis
xgl04218
Cellular senescence
xgl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120797166 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120797166 (capn1)
04217 Necroptosis
120797166 (capn1)
04218 Cellular senescence
120797166 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120797166 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120797166 (capn1)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
120797166 (capn1)
Peptidases and inhibitors [BR:
xgl01002
]
Cysteine peptidases
Family C2: calpain family
120797166 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
120797166
NCBI-ProteinID:
XP_039996467
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Position
LG12:13981161..14009055
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AA seq
706 aa
AA seq
DB search
MVEERIYATGMAAKLRSQWDRDEGLGQNHNAVKFLGQDYESLRAKSLRSGRLFEDSLFPC
AASSLGFNELGARSSKTHGVRWMRPTEFCKQPEFIVDGATRTDICQGALGDCWLLAAIAS
LTLNNSLLQRVVPHGQSFRQGYAGIFHFQFWQFGEWVEVVIDDRLPVKDGKLLFVHSAEG
TEFWSALLEKAYAKLNGCYEALSGGSTCEGFEDFTGGVTEMYELRKAPSDLYSIIKRAID
RGSLLGCSIDITSSRDMEAVTFKKLVKGHAYSVTAVDEVVYRGNMTKLVRIRNPWGEVEW
TGAWSDDSREWDNVDRSVRSRLQNRSEDGEFWMSYSDFLREFTRLEICNLTADALQNSQL
KKWSSSLYQGEWRRGSTAGGCRNYPATFWLNPQFKIMLQHPDAPGQSDCSFLVALMQKDR
RKKRKEGKDMETIGFAVYEVPNEFTGRSGVHLKREFFLTHASSARSELFINLREVSNRLR
LPAGEYIIVPSTFEPHKEADFVLRVFSEKPANSEELDDNVVAELPTETQLDESQIDAGFK
NLFRQLAGPDMEISVTELQTILNRIISKHKDLKTDGFTKEACRSMINLMDTDGSGKLGLT
EFHVLWEKIKRYLTVFRQFDLDKSGTMSSYELRMALESAGFKLTNQLFQLIILRYTEEDM
AVDFDNFVTCLVRLETMFKTFKTLDTDADGQISLNFFQWITLTMFA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggagcgcatttacgccacaggcatggccgccaagctgaggagccagtgggat
cgtgatgagggtctgggacagaaccacaacgcagtgaagtttctgggtcaagattatgag
tctctgagagccaagtccctccggagtgggaggctgtttgaggacagcctgttcccgtgt
gctgcatcgtctctgggattcaatgagcttggagcaagatcctccaagacccacggagtc
cgctggatgagacccacggagttctgcaagcagcctgagttcattgtagatggagctact
cgcacagacatctgtcagggagctctgggggactgctggctgctggcggccatcgcctcg
ctgaccttaaacaactccctcctccaaagagtggttcctcatggtcagagcttccggcag
ggatacgctggcatctttcacttccagttctggcagtttggggagtgggtggaggtggtg
atcgacgaccggctgcccgtaaaggatgggaagctgctgttcgtccactcagcagaggga
accgagttctggagcgcgctgctggaaaaggcctacgccaaactgaacggctgttatgag
gcgctgtcaggcggcagcacatgtgagggctttgaggactttacaggcggtgtgacggag
atgtacgagctgaggaaggccccttctgacctctacagcatcatcaagagggccatagac
agaggatcactgctgggctgctccattgacatcaccagctcacgagacatggaggccgtc
acgttcaagaagctggtgaagggacacgcctactccgtgacagctgttgacgaggtggtg
tacagaggaaatatgaccaagctggttcgcatcaggaacccatggggggaagtggagtgg
accggagcctggagcgatgactccagagagtgggacaatgtggatcgctcggtcagaagt
cggttacagaaccgcagcgaggacggtgaattctggatgtcgtacagcgacttcctccgc
gagttcacccgtctggagatctgcaacctgacagccgacgccctgcaaaacagccagctg
aagaaatggagctcctcgctctaccagggagaatggaggagaggcagcacagctgggggc
tgcaggaactacccagcaaccttttggctcaaccctcagttcaagatcatgctgcagcac
ccagacgctcccggccaatcagactgtagcttcctggttgccctcatgcaaaaggaccgc
aggaagaaacggaaagagggcaaagacatggagaccatcgggtttgctgtctatgaggtt
ccaaatgagtttacgggcaggtccggggtccacctgaagcgggagtttttcctcacccac
gcctccagcgctcgctctgagctcttcatcaacctgagggaggtcagcaatcggttgcgg
ctgccggcaggggagtacatcatcgtcccgtccaccttcgagccacacaaggaggccgac
tttgtcctcagggtcttctctgagaagcctgctaactctgaggagcttgacgacaatgtt
gtggcggagcttccgacagagactcagctagatgagagccagatcgacgcaggcttcaag
aatctcttcagacagctggcagggccggacatggaaatcagtgtgacagagctgcaaacc
atattgaacaggatcatcagcaaacataaagacctgaagacagacggcttcacgaaagaa
gcttgtcgcagcatgataaacttaatggatacggacggcagtggaaagctgggcctgaca
gagttccatgtactctgggaaaagattaaacgctacctgaccgtattcaggcagtttgac
ttggacaaatcgggcaccatgagctcctacgagctgaggatggcccttgaatctgcaggc
tttaagctgacgaaccagctcttccagctcatcatcctgcgctacacggaggaagacatg
gccgtggacttcgacaactttgtcacctgtctggtcagactggaaaccatgttcaaaacc
tttaagaccttggacacagatgcagatggtcaaatatccctcaacttctttcagtggatt
accctgaccatgtttgcgtaa
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