Xiphias gladius (swordfish): 120800611
Help
Entry
120800611 CDS
T07311
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl00310
Lysine degradation
xgl00514
Other types of O-glycan biosynthesis
xgl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120800611 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120800611 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xgl01003
]
120800611 (colgalt1b)
Enzymes [BR:
xgl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120800611 (colgalt1b)
Glycosyltransferases [BR:
xgl01003
]
O-Glycan biosynthesis
O-linked Gal type
120800611 (colgalt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
120800611
NCBI-ProteinID:
XP_040002774
LinkDB
All DBs
Position
LG15:23398521..23413465
Genome browser
AA seq
609 aa
AA seq
DB search
MHRVTSLLPALLFVLLPGPSRGYFPEERWSPESPLLAPRVVIALVCRNSAHSLPLFLGAI
ERLNYPKDRIALWVATDHNIDNTTVILRDWLIKVQNYYHYVEWRPEDEPSAFEDEVGPKQ
WNNLRYEHVMKLRQAALDTAREIWADYVLVADCDNLLTNRDVLWKLMSENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYMPIRKQERRGCFAVPMVHSTYLVDLRKEASHQLAFYP
PHPEYSWALDDVIVFAYSARMADVQMYVCNKETYGYFPVPVRSHATLQDEAESFLHTQLE
VMVKNPPLEPSSFLSLPPKQPNKMGFDEVFMINLVRRSDRRERMLKTLYEQELSCKVVAA
VDGKALNISEIETMGIKMLPGYKDPYHGRPLTKGELGCFLSHYNIWKEIADRGLQTSLVI
EDDLRFEVFFRRRLQTLLQEVTTHKLDWDLIYIGRKRMQVDHPEKSVPNIHNLVEADYSY
WTLGYMLSLQGAQKLLRAEPLRKMLPVDEFLPVMYDKHPVSEYMDHFERRDLLAFSAEPL
LVYPTHYTGDLGYISDTETSVVWDNETVKTDWDRAKSRKTQEQEELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgggtcacctcgctgctgcctgccctgctgttcgttctcctgccgggcccgagc
cggggctatttccccgaggagcgctggagccccgagtctccgctcctcgctccccgggtc
gtcatcgcgctggtctgccgcaactcggcgcactctctgccgctgttcctcggtgccatc
gagcgtctcaactacccgaaggaccgcattgctctgtgggtggcgaccgatcacaacata
gataacaccacagtcatcctgagagactggcttatcaaggtgcagaattactatcactat
gtggagtggagacctgaagatgaacccagtgcctttgaagacgaggtggggcctaagcaa
tggaataatctccgttatgaacatgtgatgaagctccgccaggcagcgctggacaccgcc
cgcgagatctgggccgactacgtcttggtggctgactgtgacaacctgctcacaaatcgg
gatgtgctgtggaaactgatgagcgagaacaagaccattgtagctcccatgttggagtcc
agagctgcatactccaacttctggtgcggcatgacttcacagggttattacaagcgtaca
ccggcctacatgcccatccgcaagcaggagcgtcgtggctgtttcgctgtaccgatggtc
cactctacctacctggtggacctgcggaaagaggcctcccatcagctggctttttatcca
ccccacccagagtacagctgggccctggatgacgtcatcgtctttgcctactcagctcgc
atggcagatgtgcagatgtatgtgtgcaacaaagaaacatatgggtatttcccagtgcca
gtgcgctcccatgctaccttgcaggatgaggcggagagcttcttgcacacacagcttgag
gtcatggtgaaaaatcccccgttggagccctccagcttcctgtctcttcctcccaagcag
cctaacaagatgggctttgatgaggtgttcatgataaatctggtgcggagatctgaccgt
cgggagcgaatgctaaaaactctgtacgagcaggagctcagttgtaaggttgttgctgct
gtggatggcaaagctctgaacatatctgagatagagacgatggggattaagatgctgccg
gggtacaaagatccatatcatggtcgtcctctcaccaagggtgaactgggttgtttcctc
tctcattacaacatctggaaggagatagcggaccgtggtctgcagacctccctggtcatc
gaggacgacctccgcttcgaggtgtttttcagacgtcgtctccagacgctgctgcaggag
gtgacgacacacaagctggactgggatctcatttacatcggacggaagcgcatgcaggtg
gaccatcctgagaagtcggtacccaacatacacaatctggtggaggctgactactcatac
tggacactaggctacatgttgtcgttacaaggagctcagaagctcctcagagccgaacct
ctgcgcaagatgctgcctgtcgacgagttcctccctgtcatgtacgacaaacatccagtt
tcagagtacatggaccacttcgagcgtcgcgacctgcttgcgttttctgccgagcctctt
ctggtctatccaacccattacaccggagacctcggctacatcagcgacacggaaacgtcg
gtggtctgggacaacgagacggtcaaaaccgactgggaccgagccaagtcgaggaaaact
caggagcaggaggagctgagcttcgaggcccagaattctgatgtactgcagtctgaactg
gagaactggagcgcacgggacgagttgtga
DBGET
integrated database retrieval system
