Xiphias gladius (swordfish): 120801953
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Entry
120801953 CDS
T07311
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
120801953 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xgl01002
]
120801953 (mmp2)
Enzymes [BR:
xgl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
120801953 (mmp2)
Peptidases and inhibitors [BR:
xgl01002
]
Metallo peptidases
Family M10
120801953 (mmp2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
120801953
NCBI-ProteinID:
XP_040005304
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Position
LG1:10894450..10909736
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AA seq
658 aa
AA seq
DB search
MGFPTIFSCRRVVLKLFLVQFIVFHATYAAPSPIIRFPGDDTTPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDAKTVEIMKKPRCGVPDVANYNFFHRKPMW
QNKDITYRILGYTPDLDEEVINDAFFRAFKVWSDVTPLEFTRIMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGIGGDSHFDDDEQWTLGEGQVVKVKFGNADGEFCKFPFLF
MGTEYNSCTSQGREDGFLWCSTTYNFDEDSKYGFCPHELLFTLGGNAEGSPCKFPFNFQG
EKYDGCTTVGRDDGYRWCATTEDYDRDKTYGFCPETAMSTVGGNAEGSPCVFPFTFLGDN
YESCTSSGRSDGKMWCATTRSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPIYTFTKDFRLSHDDIKGIQELYGVSTDKPLPPTHGPVTPMDICKEPVVFDAVAQIR
GETFFFKDRFLFRSVNFRSKPNGPLLVATYWPDLPSKIDAAYENPVDEKTVFFSGNEMWV
YKADELERGYPKRLSSLDLPTDLQQIDAAFNFRKNRKTYLFAGDKFWRYDEDKKKMDPGF
PKLVADSWNGIPDGMDSAFSLNGIDYSYFFKGNHYFKLEDNSLKIVKLGEITKDWLGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgggttttccgacgatatttagttgtcgtcgggttgttctcaaattgtttttagttcag
ttcatcgtctttcatgcaacatatgccgccccttcgcctattatcaggtttcctggagac
gatactacccccaaaacagacaaagaagttgctctgcactatctgaataagttttatgga
tgcccgcaagacagatgcaaccttatggtgctcaaggacaccctgaagaaaatgcaaaag
ttcttttctctgcaagaaaccggagagatcgatgccaaaactgtggagatcatgaaaaag
ccccgctgtggcgtcccagatgtggccaattacaacttcttccacaggaaacccatgtgg
cagaataaagacatcacctacagaattctgggatacactcctgatctggatgaggaagtc
ataaatgatgctttcttcagagccttcaaagtatggagtgatgtcaccccactcgaattc
acccgcatcatggatggagaggctgacatcatgattaattttggccgcaatgagcatgga
gatggttacccctttgacggcaaagatggcctcttggctcatgcctttgctccagggcca
ggcattgggggagactcccactttgatgatgatgagcagtggacactgggagagggccaa
gtggtgaaggtgaagtttggcaatgctgacggggagttctgtaaattcccctttctgttc
atgggcactgagtacaacagctgtacgtcccagggccgtgaagacggcttcctgtggtgc
tccaccacttacaactttgatgaagacagcaaatatggattctgtcctcatgaattgcta
ttcaccctgggtggaaatgcagagggctctccatgtaagttccccttcaactttcagggg
gagaagtatgacggatgcaccactgtgggcagggatgatggttaccgctggtgtgctact
actgaggactatgaccgtgacaaaacctatgggttctgccctgaaactgccatgtcaaca
gtgggaggaaacgcagaaggaagtccttgtgtcttccccttcaccttcctgggtgacaac
tatgaatcctgcacctcatctggacgcagcgatggcaagatgtggtgtgctaccaccagg
agctatgatgatgaccgcaaatggggtttctgtcctgaccaaggctacagtttgttcctg
gtagcagcccatgagtttggtcatgcccttggcttggagcactctcaggaccccggagca
ttgatggcccccatttacaccttcactaaagacttcagactttctcatgatgacatcaaa
ggcatccaggagctctacggtgtgtcgactgacaagcctctgcctccaactcacggtcca
gtcactccaatggacatctgtaaggagcccgttgtctttgatgctgtagcacaaatcaga
ggagagaccttcttcttcaaggacaggttcctgttcaggtcagtcaacttcagaagcaag
cccaacggccctctgcttgtggccacctactggcctgacctgccttccaagatagatgct
gcctatgaaaacccagtggatgaaaaaacagtcttcttctcaggcaacgagatgtgggtc
tacaaagcagatgagttggagaggggttaccccaagaggctctccagccttgaccttccc
actgacctgcagcaaatcgatgctgccttcaactttaggaagaacagaaagacttatcta
tttgctggggacaaattctggagatacgatgaagataagaagaaaatggaccctggcttc
cccaaacttgttgctgattcatggaatggcatcccagacggcatggactctgccttcagt
cttaatggcattgattacagctacttcttcaaaggcaaccactatttcaaactggaagac
aacagcttgaagattgtcaagctgggcgaaatcacaaaggactggctcggttgttga
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