Xiphias gladius (swordfish): 120805222
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Entry
120805222 CDS
T07311
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
xgl
Xiphias gladius (swordfish)
Pathway
xgl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xgl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120805222 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgl03019
]
120805222 (nup85)
03036 Chromosome and associated proteins [BR:
xgl03036
]
120805222 (nup85)
Messenger RNA biogenesis [BR:
xgl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120805222 (nup85)
Chromosome and associated proteins [BR:
xgl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120805222 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
120805222
NCBI-ProteinID:
XP_040011199
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All DBs
Position
LG3:12551569..12559854
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AA seq
652 aa
AA seq
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MEEVDVEPAITNIPAASDGKHLGFVWAPGDILVYETLYKASGATGLGCSYIHEVRKDEDI
YSPILRKLFNESHHIFVGLQTIREDLPSKNKKPQFVSISKNYRSVIRACMEELQQVAVST
KDAQVAIQYGNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKARE
VLQSESPAEHNDYWDVVVSYVMQGRLEEARQMLVKQATLQPAARNMYKMMDSLLSKMPFY
NPGGTQTLTEFDVKWRHWHEEVDRCLQDNSFASNQHLELICKILVGDEDTLLAHKELLST
WYHFLVTRLLFCHPTVKPTELHYYAQSCMTMFLDSRNVPEPLDSILLAAFEFDIHQVIKD
CSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLAVDY
FDHCPEFGRVYLELQIERVPLDTERKALKVLRICEQRQMSEQVRSICKIMAMRALRNNRL
GSALSWSIRAKDAAFATLISERFLQDYCARGTFSDLDLIDNLGPAMLLSDRLTFLGKYRE
FHKLYGEKRFREAAKLLLSLMTAKIAPRSFWMTLLTDALPLLEQKEVIFSAEQTYELMFC
LEELTSSLNTTATGTDRPVQEEDIELTKVELLRLALARNLAMSIVKEGTVET
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagacgtcgagccggcaatcactaatattcctgcagccagtgatgggaag
catttgggatttgtgtgggctcccggtgatatcctcgtgtatgagaccctttacaaagca
tcaggtgctacagggttaggctgctcctacatccatgaggtcaggaaagacgaggacata
tattcccccattttgcgcaaactcttcaatgagtcacatcacatctttgttggcctgcag
acgattagagaggaccttcccagcaagaacaaaaaaccccaatttgtcagcatcagtaaa
aactacagatctgtgatacgagcctgtatggaagaacttcagcaagttgcagtttctaca
aaagatgcacaagtggccatacagtatggaaatcaggtgtcaattctgttggccatagag
ctaatctggaatctgtgtgaagtgctgttcatcgacgctgctcctgcgggttctctgttg
ctccaccttctggactgggtaaggttacacaaggctgatgtggatgagaaggcccgagag
gtgctgcaaagcgagagccctgctgagcacaacgactactgggatgtggtggtgagttat
gtgatgcagggcaggttggaagaagccagacagatgctggtgaagcaggccaccctacag
cctgctgctagaaacatgtacaagatgatggattctctgctcagcaagatgcctttctac
aatcctggtggcacccagacgttaacggagtttgatgtgaagtggagacactggcacgag
gaggtggaccgctgcctacaggacaactcgtttgccagcaaccaacatctggagctcatc
tgcaagatcctagtgggggatgaagacactttgcttgcacataaggaattgctgagcacc
tggtaccacttcctggttactagactgctgttctgccaccccacagtcaagcccactgag
ttacattactatgcacagtcatgtatgaccatgtttctggactcgaggaacgtcccagag
cccctggacagcatcttactggctgcctttgagtttgacatccatcaggtcatcaaggac
tgcagcattgctctcaacaactggtggtttgtggcccatttgactgatctcttggatcac
tgcaaactcctgcaatctcacaacctacactttggctccaacttgagggagtttctcctg
ttagaatatgcgtctggtctcttcactcatcacagtctgtggcagttggccgtggactac
tttgaccactgcccagagtttggccgtgtctacctggagctgcagattgagcgtgttcct
ttggacacagagcgcaaagccctcaaggtgctcaggatctgtgagcagaggcaaatgtca
gagcaagtgcgtagtatctgtaagatcatggctatgcgggccctgaggaacaacagactg
ggctctgctctctcctggagcatcagggccaaagatgctgcctttgccaccctcatttca
gagaggttccttcaagattactgcgccagagggacgttctctgatctggacctgatagac
aacttgggtccagcaatgctgctcagcgacaggctcactttccttggaaagtaccgtgag
ttccacaagttgtatggagagaagcgcttcagggaggcggctaagctgctcctctccctc
atgacagccaagatcgccccccggagcttctggatgactctgctgactgacgccctgccg
ctgctggagcagaaagaggtgatcttctcagccgagcaaacctacgagctgatgttctgc
ttagaggagctcacctcctcactgaacacaacagctactggcacagaccggcccgtgcag
gaggaagacatagagctgaccaaagtggagctcctgagactcgctctggccaggaatctg
gctatgtctatagtcaaagagggaacagtggaaacatga
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