Xanthomonas hydrangeae: LMG31886_19060
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Entry
LMG31886_19060 CDS
T07925
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xhd
Xanthomonas hydrangeae
Pathway
xhd00040
Pentose and glucuronate interconversions
xhd01100
Metabolic pathways
xhd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LMG31886_19060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMG31886_19060
Enzymes [BR:
xhd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
LMG31886_19060
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
CAD7733455
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Position
LMG31886:complement(2294938..2296101)
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AA seq
387 aa
AA seq
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MLRFSSKGPYLNISTISLFLALFIAQVGITKAATGGFSSASISSETAITVTTLAELTAAL
NAKHHHIIIGGNIYGGPKLTTLNFSSTDWNNTTIEGAPGGRAVLQNIQLKFSGEKLPAGE
NIQNVVIRNISFAGNIGDLQSLPYQVEGTSNNIGINYMGVSLRRTSNAWIDHCNFYDMSD
DLLLVSMSSDYITLSYNHFYFSNSWVNMNPDPVWSWVDKSYHDLANERLAILVGYNKNDS
YIYGGNKLHVTLHHNWFGPNLAGRPLLRGWVHAYNNYFDNSTLPNGTRTAADGRRYGKQQ
YNALQIGSGSIVFSESNYFYKTNVSNHIRLESSGDIYNFHEKKNVYDATTGDSATGSTFN
NAPVKYSYEPDDAARVPGIVRSNAGPH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcttttccagtaaaggtccgtatttgaacatatctaccatctcgctgtttctt
gctctttttatcgcacaggtcggcatcaccaaggctgcgaccgggggcttttcttctgcg
tccatatcaagcgaaaccgcgattacagtgacaacgctcgcggagctgacagcggcactc
aatgctaaacatcaccatattatcatcggtggaaatatctacggcggcccaaaattaacc
accctgaatttttccagcaccgattggaacaacacaacaatcgagggtgctccaggcggc
cgtgcggtcttgcagaatatccaattgaaattcagcggcgaaaagctaccggccggggaa
aatatccaaaacgtggtcatcagaaacatctcattcgccggcaatatcggcgacttgcaa
tccttgccttaccaagtcgaaggaacttccaacaacatcggcatcaactacatgggcgta
tccttgcgacgtacatctaatgcttggatagaccactgtaatttctacgacatgagcgat
gatcttctgttagtcagcatgtcatctgattacatcaccctgtcgtacaatcatttttac
ttcagcaacagctgggtcaacatgaacccggatccggtatggagctgggttgacaagagt
tatcatgacctcgcaaacgagcgcttggcaatccttgttggttacaacaagaacgattca
tacatatatggcggcaacaagctgcacgtgacgttgcaccacaactggtttggccccaat
ctggccgggcgtccactactacgcggctgggtccatgcctacaataattactttgacaat
agcaccttaccgaatggtacccgcaccgccgcagatggtcgccgctatggaaagcagcag
tacaacgctttgcagataggtagcggcagcatcgttttttccgaatcaaactatttttac
aaaaccaatgtcagcaaccatattcgactggaatcaagcggtgacatatacaattttcat
gagaagaaaaacgtgtatgacgcaaccacaggcgattcggcgaccggctcaaccttcaat
aacgcgccggtgaaatacagctacgagcctgacgatgcggcaagagtccccggcatcgtg
cggtccaacgcggggccgcactaa
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