Xiphophorus hellerii (green swordtail): 116708440
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Entry
116708440 CDS
T07363
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
116708440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116708440
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116708440
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
116708440
NCBI-ProteinID:
XP_032402208
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Position
2:359484..372365
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AA seq
887 aa
AA seq
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MPKNRNQNRKQPDLELTHFLRHPPVPPPHPQPTSPCPSPPTLPNVPSYPHLPPIASPPLL
ISGLANPAFFIEEDSDGPAEPSLSLRPAVSVEDVDQEGGAAGGGAAGGGGEGEGGGGAAG
GGAAGGAGGGGDESSSPALDPKLSTLTVPVAPAGGRQSRGDKDGGRKRPTVWTKTRNLQV
QSEDDDEEVSIPVRAWPSESCLPSANGMLRERPASAASQTSQTSAVVSERLQELVRMFKE
RTEKAKEKLIDPDSSDEESVITAPPQPPAAPQDEEEEEEGRSEGQCVGGAGSGSEAPRGK
ETRWIRACWPIRFPASIDPFTNILYVLWMFLVSAAWNWNVWLIPVRWAFPYQTPQNAPYW
LLADYACDLIYILDIAVFQPRLQFIRGGDIVCDKKEMRKNYMKTKRFKFDVASLLPLELL
YFKTGINPLLRLPRLLKINSFFEFNERLEAILTKAYIYRVIRTTTYLLYCLHCNACLYHW
ASSYIGLGATQWVYNGVGNSYIRCYYFAVKTLITIGGLPDPTSLFEIVFQLINYFVGVFA
FSIMIGQMRDVVGAATAAQTYYRTCMDNTIKYMTSYRIPKDVQNRVKTWYNYTWQSQGML
DEQELLTQLPDKMRLDIAVDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCK
KGEVGREMYIIKAGEVQVVGGPDERTVFATLRAGSVFGEISLLAVGGVNRRTANVIAHGF
ANLFILDKKDLNEILVHYPESKKLLRKKARKMLNKGKKPEPKVEPKEPAPVPVASLRPET
PRLLRAALEMTERSSGLKGALARVKERSSKSSISLQRSLSASLRPPDPVLSPGPDPDTSL
SASSTTLCSASRSCNPADFPPVQLQLQRGAVGWDESEDEWDEGGRGK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaaccggaaccagaacaggaagcagccggacttagaactcacccacttcctg
cggcaccccccggtgccccctcctcatcctcagccgacctccccctgtccctcccccccc
accctgcccaacgtgccgtcctacccccacctgccgcccatcgccagcccgccgctcctg
atctccggcctcgctaaccccgccttcttcatcgaggaagactcagacggtcctgcagag
ccgagcctcagcctccggcccgcggtgagcgtggaggatgtcgaccaggagggaggagca
gcaggaggaggagcagcaggaggaggaggagaaggagaaggaggaggaggagcagcagga
ggaggagcagcaggaggtgcaggaggaggaggcgatgagagcagcagcccggccctggac
ccaaagctcagcaccctgacggtccccgtggccccggcaggaggccgccagagtagagga
gataaagacggtgggaggaaacgcccgaccgtctggaccaagaccagaaacctgcaggtc
cagagcgaagatgatgatgaagaagtcagcataccggtccgagcctggcccagtgagtcc
tgtctgcccagcgccaacggcatgctgagggagcgcccagcgtctgctgcaagtcagacc
agtcagaccagtgctgtggtcagtgagcgactccaggaactggtcaggatgttcaaagag
agaacggagaaagccaaagagaagctgattgacccagacagctccgacgaagagagcgtc
attaccgctccccctcagcctccagccgccccccaggatgaggaagaggaggaggaaggc
aggtcagaaggtcagtgtgtcggcggggcaggaagcgggtcggaggcgcctagaggaaag
gagactcggtggatccgggcctgctggccgatccgattccccgccagcatcgaccctttc
accaacatcctgtacgttctgtggatgttcctggtttctgcggcctggaactggaacgtg
tggctgatccccgtccgctgggcgttcccctaccagacgccccaaaacgccccctactgg
ctgctggctgactacgcctgcgacctcatctacatcctggacatcgccgtgtttcagccg
cgcctgcagttcatccgtggaggagacatcgtgtgtgacaagaaggaaatgagaaagaat
tacatgaaaaccaaacgcttcaagttcgacgtggccagcctccttcctttggagctgctg
tactttaagacgggcatcaaccctctgctacggttacctcgcctgctgaagatcaactcg
ttctttgagtttaatgagcgactggaggccatcctgaccaaagcctacatctacagggtg
atccgaaccacaacttatcttctctactgtcttcactgcaacgcctgcctctaccactgg
gcgtcctcctacatcggactgggggccacgcagtgggtctacaacggggtcggcaacagt
tatattcgctgttactactttgcggtgaaaactctgatcaccatcggcggtctgccggat
cccacctccctgtttgagatcgtcttccagctcatcaactacttcgttggagtctttgcc
ttctccatcatgattggtcagatgcgtgatgttgtcggtgcagccaccgcggctcagacc
tactaccgcacctgcatggacaacactatcaaatacatgacatcctaccgcatacccaaa
gacgtccagaaccgcgtcaagacctggtacaactacacctggcagtcacaaggcatgctg
gatgaacaggagcttctgacccagctgccagataaaatgcgtctggacatcgctgtagac
gtcaactactccatcgtgagtaaagtccctctgttccagggctgtgacaggcagatgatc
tttgacatgctgaagagtctgcgctcagtcgtctacctgcctggagattacgtctgcaaa
aagggcgaagtgggtcgggagatgtacatcatcaaagcaggggaggtgcaggtggttgga
ggtccggatgagaggacggtgttcgctacgctgagagcaggatccgtgtttggagagata
agtttgctagcggtgggcggagtcaaccggcgcacggccaacgtgatcgctcatgggttt
gccaacctgttcatcctggacaagaaagacctgaacgagatccttgtccactaccccgag
tccaagaagctgctgcgcaagaaggccaggaagatgcttaataagggaaaaaagcctgaa
cccaaagtggaacctaaggaaccggctccggtaccggtggcttctctcaggcccgagacg
cccagactgctgcgagcggctctggagatgacggagaggtcgtctggactgaaaggagct
ctggctcgggtcaaagagaggagcagcaagtccagcatctcactgcagcggtccctctcc
gcctcgctgcgacctccggaccccgtcctcagccccggaccggacccggacacgtccctc
tctgccagctccacgacgctttgctcagcttctcggagctgcaaccctgcagattttcct
cctgtgcagctgcagctgcagcgcggcgctgtgggatgggatgagagtgaggatgagtgg
gatgaaggaggaagagggaagtga
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