Xiphophorus hellerii (green swordtail): 116708781
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Entry
116708781 CDS
T07363
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116708781
03036 Chromosome and associated proteins [BR:
xhe03036
]
116708781
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116708781
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116708781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_jaz
zf-met
zf-C2HE
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
116708781
NCBI-ProteinID:
XP_032402699
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Position
2:30494582..30507471
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AA seq
836 aa
AA seq
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MLLLDMDGSSAEAVGEVDAPPKDFPSIQAVHSQEALVVDLLQQAAEAGGVVQGPAAVILE
QGHVEGMVAAAQSQQALLEAGVGVSVQRGEVEMMVMDSLDPTLMQMKTEVIDAAVGGSSA
TVGMVAGAAHQAAVATVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSAAAVDALQQGT
FVDTTAMPKSGDPVICHTLPLPEGFQVVKVGANGEVETVEQEEGVEAHSEEDEDDAEVGQ
QLLEEGEEAAQPPNHHQNWAKDPDYQPPSGGIKKAKKGKKSRLRYAEGDKDMDVSVYDFE
EEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHT
DERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEK
PFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYEC
YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKC
RYCDAVFHERYALIQHQKSHKNEKRFKCDLCDYCCRQERHMVMHRRTHTGEKPFACSQCE
KTFRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHSENCNGEVEEFENGAA
TPKKGRRGRKRKMRSRRDEDDSEDDIPEQDEGEEEGEEEAALLQEEEDLEGMELDQAPAV
IPVVAPDEPPVKRKRGRPPKNPKPQTPSRAGTASSVAAMIQVEDELTGAVENIIVKKEGG
DAATSVKQGADLAVEGGVGGGEGVEEVELTVNQETTAATAANGDLTPEMILSMMDR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgctagacatggatggcagctcagcagaagctgtgggggaggtggacgccccc
cctaaagacttcccatccatccaggccgtccacagccaggaggccctggtggtggatctc
ctccagcaggcggcggaggccgggggcgtggtgcagggaccggcggctgtcatactggag
caaggtcatgtggaaggaatggtagcagctgcccaatcccagcaggcgctgctggaagct
ggggtcggggtgagcgtgcaacgtggagaagtagaaatgatggtcatggattccctggat
cccaccctgatgcagatgaagactgaggtgattgatgctgcagtggggggatcatcagcc
acagttggcatggttgcaggagcagctcatcaggctgctgtggcaacagtggaccagact
cagatcatcactctacaggtggtcaacatggaggagcaggcagctctgggtctgggcgag
ctgcagctggttcaggtgccggtttctgccgccgccgtggacgctctgcagcaaggcaca
tttgtggataccacagcaatgccgaagtctggagaccccgtcatctgtcacacacttcct
ctgcctgagggctttcaggtggtcaaagttggtgctaatggggaggtggagactgtggag
caagaagagggagtagaggcacattctgaagaggatgaggacgatgcagaggtgggacag
cagctgctggaggaaggagaggaggctgcccagcctccaaaccatcaccaaaactgggct
aaagacccagactatcagcctccatctggggggatcaaaaaggccaagaaggggaagaag
agccgcctgcgctacgctgaaggagacaaggacatggacgtcagcgtgtacgactttgaa
gaggagcagcaggagggccttctgtctgaggtcaatgcagagaaagtagttggcaacatg
aagcctccaaagcccacaaagatcaagaagaaaggggtgaagaagactttccagtgcgag
ctgtgcagctacacatgtcctcgtcgctccaaccttgaccggcacatgaagagccacact
gatgagagaccccacaaatgtcacctctgtggaagagccttcaggacggtgactctgctg
agaaatcatctcaacacacatacagggactcgaccacacaagtgcacagactgcgacatg
gccttcgtcaccagtggagaactggtgcgtcatcgtcgctacaaacacacacacgagaag
ccgttcaaatgctccatgtgtgactacgccagtgtggaggtgagcaaactgaagcggcac
attcgctcccatactggggaacgtcccttccagtgcagtttgtgcagctacgccagcaga
gacacatacaagctgaagagacacatgaggacacactcaggagaaaaaccttatgagtgc
tacatctgccacgcccgattcacccagagcggaaccatgaagatgcacatcctgcagaaa
cacacagagaatgtggccaagttccactgtccacactgcgacactgtcatcgcacgcaag
agtgacctgggggttcatctgcggaagcagcactcgtttattgagaccgggaagaagtgt
cgctattgtgatgctgttttccatgagcgctacgctctaatccagcatcaaaagtcccac
aagaatgagaagaggttcaagtgtgacctgtgtgactactgctgccgtcaggagcgccat
atggtcatgcaccggcggacccacacaggagagaagccgttcgcgtgcagccagtgtgaa
aagaccttcaggcagaagcagctgctggacatgcacttcaaacgctaccacgaccccaac
tttgttcccacagcttttgtttgccccaagtgtagcaagacgttcacccgcaggaatacc
atggctcgtcattctgagaactgtaacggggaggtggaggagtttgagaacggagctgcc
actccaaagaaaggcaggagaggaaggaagaggaagatgaggagcaggagggatgaggat
gatagcgaagacgacatccccgaacaagacgagggtgaagaggagggtgaggaagaagca
gcactgctgcaggaggaggaggacctggagggcatggagctggatcaggctcctgctgtt
atcccagttgtggccccagatgagcctccagtgaagaggaaacgaggccgaccccccaag
aaccccaaacctcaaacccccagcagagctgggactgcttcttctgtggctgccatgatt
caggtggaggacgagctgacgggtgcagtagagaacatcatagtgaagaaggaggggggc
gacgcagcaacttctgtgaagcagggagcggacctggcagtggaaggaggggtgggtggt
ggtgagggggtggaggaggtggagctgactgtgaaccaggaaacaacagcagctactgct
gctaatggagatctcacaccagagatgatcctcagcatgatggaccgctga
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