Xiphophorus hellerii (green swordtail): 116709877
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Entry
116709877 CDS
T07363
Symbol
atxn7l2
Name
(RefSeq) LOW QUALITY PROTEIN: ataxin-7-like protein 2
KO
K11318
ataxin-7
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xhe03021
]
116709877 (atxn7l2)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116709877 (atxn7l2)
Transcription machinery [BR:
xhe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116709877 (atxn7l2)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116709877 (atxn7l2)
SAGA complex
116709877 (atxn7l2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCA7
TDBD
TPR_Epg5_C
OrsD
zf_C2H2_ZNF598
Motif
Other DBs
NCBI-GeneID:
116709877
NCBI-ProteinID:
XP_032404477
LinkDB
All DBs
Position
20:complement(30888303..30905909)
Genome browser
AA seq
786 aa
AA seq
DB search
MMAVRERAVKVMAALDRRVPSLDEFVGQSWTAWADWASVTAADGPDVDDCSKNGKKAAEA
MSLSKEDMSIFGLYPGHDDFYLVVCSHCGQVVKPQAFEKHCERRHGPQAKLYGKLRSPMP
ALQHQRPYHGHSPSHGVNPPSASSWEARGPSVGQPRPAPSSPSTPPQYRYPKNAKDGVRL
SPLEKSIHSSHKEAAVFKPPPPLEPPVLSPPPSLRDPPWPHGAPPAGRPASSDKPPPQRK
DSPQLSAVMGHRVPRPYNKVASKRECDLDKHCGVLDPDRKKVCTRLLTCNIHSIHQRRKV
VGRSKNFDQLVAELKMKVREKGAQALDGGFSTGGSPSPEAPREQAGVPNCRRPLASLPAF
SRSMAVSECAPEEEKQWQDEAGLRAPSPLLHGHISTDDSEAEAAEELPDFPSSTTHPTPA
AVCSFGSHSLGHGIYTFDRRLHHVRSALSSMLEQHISAHLWKKIPQATDLLSPTSSAKSI
ISSSSVSIATSSSSSSHSKVRAGSHISSSLRNASSSPSRGPGRPLTAPQSENSGGGFAGS
GSGSGSGSHPLSLGKPGLGRQVAAGRSRKPVGRPSKQMLKLREEAATAAAFRKRKAPSQE
GEHSGPERNCIILQDRGPPPSSYSSSSSKAPSSSLHPHGQTNGTLSPSSKPRPQPPPSES
HSPAAKAVWTYKRTLPPLSHASPPDLSPATNSHSRTGVGDSGLLGQGGGGRTFLEHRGLK
KRKGGGMEEHPPSSRLSVPRLPSSSSSSGSSSSPRSTFYPWKDSKSGGLDGDMDKKLASQ
KPKLHH
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggtgcgtgaacgcgcagtaaaagtaatggctgctctggatcggcgggtacct
agcctcgatgaattcgttggtcaaagctggactgcctgggccgactgggctagtgtgaca
gcggcagatgggcctgatgtggacgactgcagcaaaaatgggaagaaggctgcagaagct
atgtcactcagtaaagaggacatgtccatctttggcctgtacccgggccacgatgacttc
tacctggtggtgtgcagccactgtggccaggtggtgaagcctcaggcctttgagaagcac
tgcgagcggagacacgggccccaggccaagctctacggcaagctgcgctctcccatgccg
gccctccagcaccagagaccctaccacggccactctccctcgcatggggtcaaccccccc
tctgcgtcgtcgtgggaggctcgagggccgagcgtggggcagccacggcccgcgccctct
tccccctccaccccacctcagtacagatacccgaagaacgccaaggacggagtacggctt
tcgcccctggagaagtccatccacagcagccacaaagaggcggccgtgttcaagccgccg
ccgcccctggagcctccggtcctgtctccgcctccgtcccttcgagaccctccctggccg
cacggggccccacccgctggccggccggcatccagcgacaagccgcccccgcagaggaag
gactcgccccagctgtctgccgtgatgggccaccgggtcccgaggccctacaacaaagtg
gcctccaaaagggagtgcgatctggataagcactgcggcgtcctcgaccccgacaggaag
aaggtctgcactcggctcctgacgtgcaacatccactccatccaccagcgcaggaaggtg
gtgggtcgcagcaagaactttgaccagctagtggcagaacttaagatgaaggtccgagag
aagggagcccaggccctggatggaggcttctctaccggagggtcacccagtccggaggcc
cccagggagcaggccggtgtccccaactgcaggagacctctggccagcctccctgcgttc
agtcggtccatggccgtgtcggagtgcgccccggaggaggagaagcagtggcaggatgag
gcggggctccgggccccgtcccctctgctgcatggacacatctccactgacgacagcgag
gctgaagcggctgaagagctgccagacttcccttcgtctaccacacaccccacacctgca
gcggtgtgctcgttcggcagccactcgttgggtcacgggatctacacgtttgacagaagg
cttcaccacgtgcgatcggccctcagcagcatgctggagcagcatatcagcgctcatcta
tggaagaaaatacctcaagccacagaccttctgtcaccaacctcctcagccaagtccatc
atttcttcttcttctgtctccatagcaacatcctcctcctcttcgtctcattctaaggtt
cgcgcaggcagtcacatcagctcgtctctcagaaacgcgtcgtcctcccccagccgggga
ccgggcagacctctgaccgcgccgcagtcggagaattctggcggtggttttgccggttct
ggttctggctctggttctggctctcaccccctgtccttggggaagcctggcctggggcgt
caggtggcggcgggcaggtccaggaaaccagtggggcgacccagcaagcagatgctgaag
ctgcgagaggaggcggccaccgccgccgcattccgtaaacgcaaggccccgtcgcaggaa
ggagagcactctggccctgagaggaactgcatcatcctgcaggacaggggacccccacct
tcctcctactcctcttcctcctccaaggccccctcttcctccctccaccctcatggacag
accaatggcactctctcccccagcagtaagccccgcccccagccgcccccctctgagtcc
cactcccctgccgccaaggcggtgtggacttacaagcggactctcccccctctgagccac
gcctcccccccagacctctcccctgccactaactcccacagtcggaccggtgtgggggac
tcggggctgctgggccagggcggcggggggaggacctttctggaacatcggggactgaag
aaacggaaggggggaggcatggaggaacatccgccctcatccagactctcagtgccgcgc
ctgccttcgtcctcctccagctctggctcctcatcctcgccacgctccactttctacccc
tggaaggacagcaagagtggcggtctggacggagacatggacaagaagctggcctcacag
aagccaaaactgcaccattaa
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