Xiphophorus hellerii (green swordtail): 116710043
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Entry
116710043 CDS
T07363
Symbol
slc6a11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116710043 (slc6a11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116710043 (slc6a11)
Transporters [BR:
xhe02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116710043 (slc6a11)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116710043
NCBI-ProteinID:
XP_032404722
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Position
20:12686781..12714281
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AA seq
611 aa
AA seq
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MTAEKSGPVINGKPEDGRDPDGSSSSLDNDEYNERGMWNNKIEFILSVAGEIIGLGNVWR
FPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGIGYA
TQVIEAHLNVYYIVILAWAIFYLFNCFTTELPWAGCGHYWNTENCVDYYGENATNITNPN
ATSPVIEFWERRVLKISDGIEHMGGMRWELAMCLALAWFICYFCIWKGPKSTGKVVYVTA
TFPYVMLLVLLIRGVTLPGAFDGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLGCLT
ALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESGPGLA
FIAYPKAVTMMPLSPLWACLFFMMLIFLGLDSQFVCVESLVTAVVDMYPETFRKGYRREL
LILCMSIVSFLIGLIMCTEGGMYVFQLFDAYAASGMCLLFVAIFESICIGWVYGGDRFYL
NIEDMIGYKPFVLIKWCWMILTPGICAGIFLFFLIKYKPLKYNNVYIYPDWGYGIGWFMA
MSSMVCIPLGIIWMIWKTPGTFSERMKKLTTPSPDLKMRGKLAALSPYAVNDAKLKADGK
ISTISEKETHF
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgagaagagtgggcctgttataaacggtaaaccagaggatggcagagacccg
gacgggtccagctctagcctcgacaatgacgagtacaatgagaggggcatgtggaacaac
aagatcgagttcatcctgtctgtggctggagagatcattgggttgggcaacgtttggagg
ttcccttacctctgctacaagaatggaggaggtgccttctttgtgccatacgtcatcttc
ttcgtgtgctgcggtattcctgtatttttcctggagacggccttgggtcagttcacaagc
gaaggtggcatcacatgctggaggaaagtttgcccattgtttgagggtatcggctatgca
acacaggtgattgaagcccatctcaacgtgtactacatagtaatcctagcctgggccatt
ttctacctctttaattgtttcacgactgagctgccgtgggctggctgtggccattactgg
aatacagaaaactgtgttgattattacggggaaaacgccaccaacatcaccaaccccaat
gcaacatctccagtcattgagttttgggaacggagagtcctgaagatatcagatggtatt
gagcacatgggagggatgcgctgggagctggccatgtgtctggctctggcctggttcatc
tgctacttctgcatctggaagggacccaagtcaactggcaaggttgtgtatgtaacagct
acgtttccgtatgtcatgctgctggtcctactgatcagaggagtcacactgcctggagct
tttgatggcatcaagttctacctctacccggacatttcacgtctctctgaccctcaggtg
tgggtggatgcaggaacccaaattttcttctcctatgccatctgcctgggctgtctcact
gctcttggaagttacaattcctataacaacaactgctacagggattgcatcatgctgtgt
tgtctgaacagtggcaccagctttgtggcaggtttcgccatcttctctgttttgggtttc
atggcctatgaacaaaatgttcccatcgaggctgtggctgaatctggtcctggtcttgct
ttcattgcgtaccccaaagctgtgaccatgatgcctctgtctccactttgggcttgtctc
ttcttcatgatgctaatcttccttggcttggacagtcagtttgtgtgtgtggagagttta
gtgacagctgttgtggacatgtacccagagaccttcagaaagggttaccgcagagagcta
ctgattctctgcatgtccatagtctctttcctcataggactcatcatgtgtacagaggga
ggaatgtacgtcttccagctgtttgatgcatatgcagccagcgggatgtgtttgctgttt
gtggccatatttgagtccatatgtatcggctgggtgtatggaggcgacagattctaccta
aatattgaggacatgattggatacaaacctttcgtcttgatcaaatggtgctggatgatc
ctgaccccgggcatctgtgctggaattttcctgttcttcctgattaaatacaagcctttg
aagtacaacaacgtgtacatctatcctgactggggctacggtattggctggttcatggct
atgtcctccatggtgtgtatcccactgggcattatctggatgatctggaaaactcctggg
accttttctgagagaatgaagaagctgaccactcccagccctgacctaaaaatgagaggc
aaacttgctgccctcagtccttacgctgtcaatgatgccaaacttaaagcagatggcaaa
atatccaccatctcagagaaggagacgcatttctaa
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