Xiphophorus hellerii (green swordtail): 116711123
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Entry
116711123 CDS
T07363
Symbol
pparg
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03320
PPAR signaling pathway
xhe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116711123 (pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
116711123 (pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116711123 (pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xhe03310
]
116711123 (pparg)
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116711123 (pparg)
Nuclear receptors [BR:
xhe03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
116711123 (pparg)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
PPARgamma_N
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116711123
NCBI-ProteinID:
XP_032406398
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Position
20:13139448..13158312
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AA seq
526 aa
AA seq
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MVDTQQLLAWPVGFSLSTVDLPELDDSPHYLDMKHLSDYASISSSSIPSSLSPPLVSSIS
SAGLAYDISPPLSEEHLTNMDYTNMHSYRTEMETHNPIKMEPESPPQYSDNPLFSKFPDD
ASPSALNIECRVCGDKASGFHYGVHACEGCKGFFRRTIRLKLVYDHCDLHCRIHKKSRNK
CQYCRFQKCLNVGMSHNAIRFGRMPQAEKEKLLAEFSSDMEHMHPEAADLRALSRHLYEA
YLKYFPLTKAKARAILSGKTGEKVPFIIHDMKSLIEGEQFINCRQIPAQEHQLMSTVTVG
GIPGAYSGSDYGALGTGINGLTPDGAELRFFKSCQSRSAEAVREVTEFAKSIPGFINLDL
NDQVTLLKYGVIEVLIIMMSPLMNKDGTLISYGQIFMTREFLKSLRKPFCQMMEPKFEFG
VKFNTLELDDSDMALFLAVIILSGDRPGLLNVKPIEQLQETVLHSLELQLKLSHPDSLQL
FAKLLQKMTDLRQIVTDHVHLIELLKKTEVDMLLHPLLQEIMKDLY
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggtggacacccagcagctcctagcttggcctgtcggtttcagcctgagtacagtggac
ctgccagagctggacgacagcccccactaccttgacatgaaacatttgtcagactatgcc
tccatttcctcctcctccatcccttcctccttgtctcccccacttgtatcctccatctca
tctgctggcttggcctacgacatcagtcctccgctcagtgaagaacatttgacgaatatg
gactacacaaatatgcacagctacaggacagagatggagacacacaacccaattaagatg
gaaccagagtcacctccacagtactctgacaaccctttgttctccaagttcccagacgat
gcatcaccgtcggcgttgaacatcgagtgccgcgtgtgcggagacaaagcctcggggttt
cactatggggtccatgcctgtgagggctgcaagggtttcttcagacgcacaatcaggcta
aagctggtatacgatcactgtgatcttcactgtcgcattcacaagaagtcacgcaacaaa
tgtcaatactgccgtttccagaagtgcctcaatgttgggatgtcacacaatgccattcgt
tttggccgaatgcctcaggcagagaaggagaagctgttggctgagttctcgtctgacatg
gagcacatgcacccggaggctgcagatctaagggctctgtcccggcatctgtatgaagcc
tatctgaagtatttcccccttaccaaagccaaggccagggcaatcctctctgggaagacg
ggagaaaaagtgcctttcatcattcatgacatgaagtctctaatagaaggggagcaattc
atcaactgtaggcagataccagcccaggaacaccagctgatgtccaccgttacagttgga
ggaatcccaggagcctactcagggtcagattatggagctttgggaacggggatcaacgga
ttgacacctgatggggcggagctacgtttcttcaaaagctgtcagtcacgctctgcagaa
gcagtaagagaagtgacagaatttgcaaagagcattccaggattcatcaatctggatctc
aatgatcaagtgacgttgctgaaatacggagtgattgaagttttgatcatcatgatgtcg
cctctgatgaacaaggatggcaccctgatctcctacggacagatcttcatgacgcgggag
ttcctcaagagtctcaggaaacctttctgtcagatgatggagccaaagtttgagtttgga
gtcaagtttaacactctggagctggatgacagtgacatggcgctgtttttggctgttatt
atcctcagtggggaccggcccggcctgctgaacgtgaagcccatcgagcagcttcaagag
acagtgctccattcgctggagctgcaactgaagctcagccatccagactccctgcagctg
tttgccaagctgctccagaagatgacggacctgcgtcagatagtcactgaccatgtgcac
ctcattgagctgctgaagaagacagaggtggacatgctcctacaccctttgctgcaagag
atcatgaaggacttgtattag
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