KEGG   Xiphophorus hellerii (green swordtail): 116717804
Entry
116717804         CDS       T07363                                 
Name
(RefSeq) PHD finger protein 1-like
  KO
K11467  PHD finger protein 1
Organism
xhe  Xiphophorus hellerii (green swordtail)
Pathway
xhe03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:xhe00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    116717804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:xhe03000]
    116717804
   03036 Chromosome and associated proteins [BR:xhe03036]
    116717804
Transcription factors [BR:xhe03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    116717804
Chromosome and associated proteins [BR:xhe03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     116717804
SSDB
Motif
Pfam: Tudor_2 PHD Mtf2_C PHD_ash2p_like PHD_2 Chromo DUF4537 ASH2L-like_WH
Other DBs
NCBI-GeneID: 116717804
NCBI-ProteinID: XP_032415316
LinkDB
Position
3:complement(2961794..2981608)
AA seq 546 aa
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGVEE
VCCICDAPPLKEPLINCLKCHHGYHPECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRIPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLLKPLLYGDRFYQFQCSVCTKGPETVQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPRQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLVTDPPISITHRRSPLSLPCQRRVGGSESRKSKRRIMETQACPPPVA
ANPVELLPCCHGYMGGANLYNSRKLDEEMDASPPPKRMYALYHTTYNGNTPLSRGLHHYN
SMEDTCRLPPPCFPYPFSSSGTPHLHHLHQHHHHNHQHNHQHQPGQKQLEPLILRDGPPY
QSGAGGGGGSGGAGSGAGMGVGGGGGDGTVVRSWAGGGEAVRILARRVTPDGKVQYLVEW
DNVGLY
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggggggagtcagtgagggagatgatgtgttggctcgttggagtgatggactactgtac
cttggcaatgtgaagagagtcgacggagtcaagcaatgctgcttggtgagattcgaggac
aactcagagttctgggttctgagaaaggacattcactcgttcgctgccggagtggaagaa
gtttgctgtatttgtgacgccccgcctcttaaagaacccctcataaattgtcttaaatgt
caccacggttatcatccggagtgccacacgccgaccatcgagccagaagctgacagcgac
tcctggatttgtcgacaatgtgtttttgctgtcgccaccaagagaggcggagctctgaaa
cgcggacgctttgcccgactcatgcagttcatgaaactccggatcccctaccagctgtcg
tccttagactgggatcctcagcatctgaccaatcagcagcagtgttactgctactgcgcc
ggacctggagagtggaacctgaagatgctgcagtgtggcagctgcggtcagtggttccat
gaggcctgcactcagtgtctattaaagccattgctgtatggagacaggttttatcagttc
cagtgttcagtttgtacaaagggaccggagacagtccagaggctgcccatgacctgggtg
gacctggctcatttagtcctctaccacctctcgctgtgctgtaagaggaaatactttgat
ttcgaccatgaaatcctgtccttcaccaacgagaactgggactcgttgctcctgggcgcg
ctgtctgacacgccgaggcaggaccgctgtcacaatctcctcaacgctctcaactctcac
aaggacaggtttgtctctggaaaggagatcaagaagaagaagtgtctgtttgggctgcag
gtccgagctccgcctcctctgacgtctgattcgtcgcctctcgtcaccgatccgcctatc
agcatcactcacaggagaagcccgttgtcactgccctgccagaggagagtgggggggtcg
gagtcacgtaaatcaaagcgtcgcatcatggagacacaggcctgtccaccaccggtcgct
gccaacccggtggaacttctgccatgttgccatggctacatgggaggagccaacctgtac
aactccaggaagttggatgaggagatggatgcaagcccccctcccaagcgaatgtatgcg
ctgtaccacaccacctacaatgggaacactcctctctccaggggtcttcatcactacaac
agcatggaggacacctgcagattacctccaccatgcttcccataccccttcagctccagc
gggaccccccacctccatcacctccaccagcaccaccaccacaaccaccaacacaaccac
cagcaccagccaggtcagaagcagctggagcccctcatcctgcgcgacggtcctccgtat
cagagcggtgcgggcggcggaggaggcagtggtggggcgggaagtggagcggggatgggt
gtgggtgggggcgggggcgacgggactgtggtccggagttgggcaggaggaggggaggcc
gtgaggatcctggcaagacgcgtgactccagacgggaaggtgcagtacctggtggagtgg
gacaacgtgggtctgtactga

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