Xiphophorus hellerii (green swordtail): 116717804
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Entry
116717804 CDS
T07363
Name
(RefSeq) PHD finger protein 1-like
KO
K11467
PHD finger protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116717804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xhe03000
]
116717804
03036 Chromosome and associated proteins [BR:
xhe03036
]
116717804
Transcription factors [BR:
xhe03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
116717804
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116717804
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
DUF4537
ASH2L-like_WH
Motif
Other DBs
NCBI-GeneID:
116717804
NCBI-ProteinID:
XP_032415316
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Position
3:complement(2961794..2981608)
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AA seq
546 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFAAGVEE
VCCICDAPPLKEPLINCLKCHHGYHPECHTPTIEPEADSDSWICRQCVFAVATKRGGALK
RGRFARLMQFMKLRIPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLLKPLLYGDRFYQFQCSVCTKGPETVQRLPMTWVDLAHLVLYHLSLCCKRKYFD
FDHEILSFTNENWDSLLLGALSDTPRQDRCHNLLNALNSHKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLVTDPPISITHRRSPLSLPCQRRVGGSESRKSKRRIMETQACPPPVA
ANPVELLPCCHGYMGGANLYNSRKLDEEMDASPPPKRMYALYHTTYNGNTPLSRGLHHYN
SMEDTCRLPPPCFPYPFSSSGTPHLHHLHQHHHHNHQHNHQHQPGQKQLEPLILRDGPPY
QSGAGGGGGSGGAGSGAGMGVGGGGGDGTVVRSWAGGGEAVRILARRVTPDGKVQYLVEW
DNVGLY
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtcagtgagggagatgatgtgttggctcgttggagtgatggactactgtac
cttggcaatgtgaagagagtcgacggagtcaagcaatgctgcttggtgagattcgaggac
aactcagagttctgggttctgagaaaggacattcactcgttcgctgccggagtggaagaa
gtttgctgtatttgtgacgccccgcctcttaaagaacccctcataaattgtcttaaatgt
caccacggttatcatccggagtgccacacgccgaccatcgagccagaagctgacagcgac
tcctggatttgtcgacaatgtgtttttgctgtcgccaccaagagaggcggagctctgaaa
cgcggacgctttgcccgactcatgcagttcatgaaactccggatcccctaccagctgtcg
tccttagactgggatcctcagcatctgaccaatcagcagcagtgttactgctactgcgcc
ggacctggagagtggaacctgaagatgctgcagtgtggcagctgcggtcagtggttccat
gaggcctgcactcagtgtctattaaagccattgctgtatggagacaggttttatcagttc
cagtgttcagtttgtacaaagggaccggagacagtccagaggctgcccatgacctgggtg
gacctggctcatttagtcctctaccacctctcgctgtgctgtaagaggaaatactttgat
ttcgaccatgaaatcctgtccttcaccaacgagaactgggactcgttgctcctgggcgcg
ctgtctgacacgccgaggcaggaccgctgtcacaatctcctcaacgctctcaactctcac
aaggacaggtttgtctctggaaaggagatcaagaagaagaagtgtctgtttgggctgcag
gtccgagctccgcctcctctgacgtctgattcgtcgcctctcgtcaccgatccgcctatc
agcatcactcacaggagaagcccgttgtcactgccctgccagaggagagtgggggggtcg
gagtcacgtaaatcaaagcgtcgcatcatggagacacaggcctgtccaccaccggtcgct
gccaacccggtggaacttctgccatgttgccatggctacatgggaggagccaacctgtac
aactccaggaagttggatgaggagatggatgcaagcccccctcccaagcgaatgtatgcg
ctgtaccacaccacctacaatgggaacactcctctctccaggggtcttcatcactacaac
agcatggaggacacctgcagattacctccaccatgcttcccataccccttcagctccagc
gggaccccccacctccatcacctccaccagcaccaccaccacaaccaccaacacaaccac
cagcaccagccaggtcagaagcagctggagcccctcatcctgcgcgacggtcctccgtat
cagagcggtgcgggcggcggaggaggcagtggtggggcgggaagtggagcggggatgggt
gtgggtgggggcgggggcgacgggactgtggtccggagttgggcaggaggaggggaggcc
gtgaggatcctggcaagacgcgtgactccagacgggaaggtgcagtacctggtggagtgg
gacaacgtgggtctgtactga
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