Xiphophorus hellerii (green swordtail): 116718844
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Entry
116718844 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: inositol 1,4,5-trisphosphate receptor type 3-like
KO
K04960
inositol 1,4,5-triphosphate receptor type 3
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04070
Phosphatidylinositol signaling system
xhe04114
Oocyte meiosis
xhe04210
Apoptosis
xhe04218
Cellular senescence
xhe04270
Vascular smooth muscle contraction
xhe04371
Apelin signaling pathway
xhe04540
Gap junction
xhe04621
NOD-like receptor signaling pathway
xhe04625
C-type lectin receptor signaling pathway
xhe04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116718844
04020 Calcium signaling pathway
116718844
04070 Phosphatidylinositol signaling system
116718844
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
116718844
04210 Apoptosis
116718844
04218 Cellular senescence
116718844
09144 Cellular community - eukaryotes
04540 Gap junction
116718844
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116718844
04625 C-type lectin receptor signaling pathway
116718844
09152 Endocrine system
04912 GnRH signaling pathway
116718844
09153 Circulatory system
04270 Vascular smooth muscle contraction
116718844
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xhe01009
]
116718844
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116718844
Protein phosphatases and associated proteins [BR:
xhe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116718844
Ion channels [BR:
xhe04040
]
Ligand-gated channels
IP3 receptor
116718844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ins145_P3_rec
RYDR_ITPR
MIR
RIH_assoc
Ion_trans
Motif
Other DBs
NCBI-GeneID:
116718844
NCBI-ProteinID:
XP_032416985
LinkDB
All DBs
Position
1:32307140..32350063
Genome browser
AA seq
2672 aa
AA seq
DB search
MSDSASSFLHIGDIVSLYAEGSVNGFISTLGLVDDRCVVEPAAGDLENPPKKFRDCLFKV
CPMSRYSAQKQYWKAKQAKHEKDKIADVVLLQKLQHASNLEQKQNETENRKVHGDVVKYG
TVIQLLHMKSNKYLTVNKRLPALLEKNAMRVTLDGTGNEGSWLFIQPFWKLRANGDNVVV
GDKVIMNPVNAGQPLHASNYELSDHPGCKEVNSVNCNTSWKINLFMMFSDHREEVLKGGD
VVRLFHAEQEKFLTCDEYKSKLHVFLRTTLRQSATSATSSNALWEVEVVHHDPCRGGAGH
WNSLYRFKHLATGNYLAAEENPGYKGDNPELSSSMDASRSSKRFHGERIKYKLVVVPHGN
DIASLFELDPTTLQKTDSFVPRNSYVRLRHLCTNTWIQSTNVPIDIDEERPIRLMLGTCP
TKEDKEAFAIVSVPVMEIRDLDFANDASAMLATVVDQFNSGFISQNDRRFAIKLLEDVVF
FVVDVSNSGQPVLDVVMSKPNRERQKLMREQNILKQIFGILKAPFKDRGEDEGPLLRLEE
LADQKNAPYQYMLRLCYRVLRHSQDDYRKNQEHIAKQFGVMQSQIGYDILAEDTITALLH
NNRKLLEKHITKTEVETFVSLVRKNREPRFLDYLSDLCVSNNVAIPVTQELICKCVLDPK
NQDILIKTERRVPKEAHPGAAQGEYLGMDEYGDEDEVWLMWTDKTNEKQDKSIRQLAQEA
RQGNAHDENVLTYYRYQLKLFARMCLDRQYLAIDEISKQLDVELIFLCMMDETLPFDLRA
SFCRLMLHAHVDRDPQELVTPVKFARLWTEIPTSITIKDYDSNLDDSRDNKKNRFANTMV
FMEEYLNNVLNDELPFHNEEKNKLTYEVVSLARHLIYFGFYSFFELLRLTRTLLGIIDCK
PNPAHSSIPFQEESSGRNVRRTIHGMGQMMSTMVLNRRQSTLGGAGPRGAGFVLEGQRGS
KDCIDNLDLTVMDTKLKILEILQFILNVRLDYRLSFLLSVFKKEFLDVYPMAEADATTNV
EQAATVNLQQIGDQAEAMFGVGKMNSILEVDDEGGRMFLRVLIHLTMHNYAPLVSGALQL
LFRHFSQRQEVLHTFKQVQLLISTLDVENYKLIKADLDRLRTLVEKSELWVEKKSSGGGD
GKKDKKEKGEGAAEDPSPKKEKQQKGNENYQNVKEILERLNKMCSSGVWKKQQRLLKNMG
AHKVMLDLLQVSYDKNDVKMQEIIKYTHMFLQKFCMGNQENQALLHKNLNLFLNPGLQEA
ETVQHIFSNNYQLCSEISESVLQHFIHCLATHGRHVQYLNFLHTIIKAEGKYVKKCQDMI
MTELTNAGEDVVVFYNDKASFNTMLELMAESREGVGEKSPLRYHISLVELLAACAEGKNV
YTEIKCTSLLPLEDVVRVVTHEDCITEVKIAYVNFVNHCYVDTEVEMKEIYTSNHIWKLF
EDFTVDMARVCNKREKRLTDPVLEKYIINVVFDTITAFFSSPFSENSTSLQTHHTIVVQL
LQSSVRLLDCPWLLPLHRGQVEACIKTLSLTAKNRSISLPLELEALINNVLSSLAVNTLN
RSAYKTPTRSARPVPYDYKNIIEKLQDIINTLEERLKPLVNSELSVLVDVLHQPELLFLE
GSDARQRCESGGFISKLIQHTKALMSAEEKLCIKVLRTLQEMLIRTLDFDEKGMMLRKVL
LQNYLFSNRKSNQKNDLAELGAAGGEQERDWAAVAAIQCRLDREGGTKLFTDLVMSSKND
KIFQESIQLAICLLEGGNTEIQNSFYKLMMGDNKSEKFFKVLHDRMKEAQMDIKATVSVN
VGEMTHKANEKELEAGGLPLMVHGQGIAPVTAAAAMPTQQAEEQREVEAEMGPAVTIMKP
ILRFLQLLCENHNNNLQNFLRCQNNKTNYNLVCETLQFLDIMCGSTTGGLGLLGLYINES
NVHLIIQTLETLTEYCQGPCQENQTCIVTHESNGIDIITALILNDISPLCRYRVEMVLQL
KDNASKLLLALMESRHDNENAERILFNLRPRELVDVIKKAYQQESECEEEQVEVEVSPRE
VGHNIYILAQQLARHNKVLQNLLKPPKNSKEGEEGISSMLTLQSRPLSQMLKSSAPAEVV
DQDPLDYYDQLTSQIEIVREDRSMEQIVFPVHPICEFLTEESKLRVFNTTEQDEQGSKVT
HFFEQTSFLHGEMEWQKKLRSMPVLYWFSRRMTLWGTISFNLAVFINLIIAFFYPYDSGQ
GAIDDSMLLMLFWILTGLSVLGLFSKQYGLQPLTLALILRSIYHLGIGNTLILLGSLNLI
NKVVFVVSFVGNNGTFIMGYKAMVMDVEFLYHLAYVLTSTLGLFVHELFYSILLFDLIYR
EETLFNVIKSVTRNGRSILLTALLALILVYLFSILGFLFLKEDFIMEVDPLLQLSADPQH
TEAAQDFLKSCSTDGVSCTAETSVETVAEEEGEPSTERACDTLLMCIVTVLNHGLRNGGG
VGDVLRKPSKNEPLFPARVVYDLLFYFVVIIIVLNLIFGVIIDTFADLRSEKQKKEEILK
TTCFICGLERDKFDNKTVSFEEHIKLEHNIWNYLYFIVLVREKNQTDYTGPESYVAHMIK
NNNLDWFPRMQAMSLVVTDGDGEQNEMRMLQDKLALTMKVVTTLTGQLNELKEQMTEQRK
RKQRMGFVDVQAGASGAVPPSAAGGNHQIYKS
NT seq
8019 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactctgcctccagcttcctccacatcggagacatcgtgtctctgtacgcggag
ggttcggtgaacggcttcatcagcacgctggggttggtggacgatcgctgcgtcgtggaa
ccggctgctggagatctggagaacccgcccaaaaagttcagagactgcctgttcaaggtg
tgtccgatgagccggtactcggcccagaagcagtactggaaggccaagcaggccaagcat
gagaaggacaagatcgccgacgtggttctgctgcagaagctgcagcacgcgtccaacctg
gagcagaagcagaacgagacggagaacaggaaggtccatggcgacgtcgtcaaatacgga
accgtcatccagcttctccacatgaagagtaataaatatctgacggtgaacaagcgtctg
ccggcgctgctggagaagaacgccatgcgggtcacgctggacgggacggggaacgaggga
tcctggctcttcatccaaccgttctggaaactccgggccaacggagacaacgtggttgtg
ggagataaagtcatcatgaacccggtgaacgccggccagccgcttcacgcctccaactac
gagctcagcgaccatccaggctgcaaggaggtcaactctgtgaactgcaacacgagctgg
aagatcaacctgttcatgatgttcagcgaccaccgagaggaagtcctgaaaggaggcgac
gtcgtccgactgtttcacgccgagcaggaaaagtttctgacctgcgacgaatacaagagc
aaactgcacgttttcctgaggacgactctgaggcagtcagccacgtcggctaccagctcc
aacgccctgtgggaggtcgaggtcgtccaccatgacccctgccgcgggggggcggggcat
tggaacagcctgtacaggttcaaacacctggcgacaggaaactacctggctgccgaggag
aacccggggtacaaaggggacaaccctgagctgtcgtcctcgatggacgccagccgcagc
agcaagcgtttccatggcgaacggatcaagtacaagctggtggtggttccccacggcaac
gacatcgcctcgctgttcgagctcgacccgacgaccctgcagaaaaccgactccttcgtc
ccgcggaactcttacgtgcggctgagacatctgtgcaccaacacctggatccagagcacc
aacgttcccatcgacatcgacgaggagcggcccatcaggctcatgctgggaacttgtccc
accaaggaggacaaggaggccttcgccatcgtttccgttcctgtcatggagatccgcgac
ctggacttcgccaacgacgccagcgccatgctggccaccgtagtggaccagttcaactcc
ggcttcatcagccagaacgaccgccgcttcgccatcaagctgctggaggacgtggttttc
ttcgtggtcgacgtgtccaacagcggccagccggttctggacgtggtcatgtccaaaccc
aaccgggagcggcagaaactgatgagagagcagaacatcctgaagcagatcttcggcatc
ctgaaggctccctttaaggaccgcggtgaggacgagggcccgctgctgcgcctagaggag
ctggccgaccagaagaacgctccgtaccagtacatgctgcggctctgctaccgggtgctg
aggcattcccaggacgactaccgcaagaaccaggaacacatagcgaagcagtttggagtg
atgcagagtcagatcggctacgacattctggcggaggacaccatcaccgctctgctccac
aacaaccgcaaactgctggagaaacacatcaccaagacggaggtggagacgttcgtcagc
ctggtgcgcaagaaccgggagcccaggtttctggactacctctctgatctgtgtgtgtcc
aacaacgtggccatccccgtcacacaggagctgatctgtaaatgtgtgctggaccccaaa
aaccaggacatcctcatcaagacggagcggcgggtcccaaaagaggctcatcctggagcc
gctcagggagaatacctgggaatggacgagtacggagacgaggacgaggtctggctgatg
tggacggataagaccaacgagaagcaggataagagcatccgccagctggcccaggaagcc
agacaaggaaacgctcacgatgaaaacgtcctcacctactacaggtaccagctgaagctc
tttgctcggatgtgtctggaccgccagtacctggccatagatgagatatccaagcagctg
gacgtggagctcatcttcctctgcatgatggacgagacgctgccctttgacctccgggct
tctttctgccgcctcatgcttcacgcacacgtagaccgagaccctcaggaactcgtgacg
ccggtgaagttcgcccgactctggaccgagatcccgacctccatcaccatcaaggattat
gattccaacctggacgacagcagagacaacaagaagaaccgttttgcgaacaccatggtg
ttcatggaggagtacctgaacaacgtcctgaacgatgagcttccgttccacaacgaggag
aaaaacaaactcacatacgaggtggtgagtttagccagacatttgatctactttggtttc
tacagtttctttgagctgctcagactcaccaggactctgctgggcatcattgactgcaaa
ccgaaccctgcacacagcagcatcccgtttcaggaggaaagctcagggaggaacgtaagg
cgcaccatccatgggatgggacagatgatgtccaccatggtcctcaaccggaggcagtcc
acgctcggcggcgccgggccgaggggggccgggtttgtgctggagggacagagaggcagc
aaagattgcatcgacaatctggatctaacggtgatggacaccaagctgaagatactggag
attttacagttcatcctgaacgtccggctggactaccgtctgtccttcctgctctccgtc
ttcaaaaaggagtttttggacgtttaccccatggctgaagctgacgccaccactaacgtg
gaacaagcagccaccgtcaacctgcagcagatcggcgaccaggcggaggccatgtttgga
gtcgggaagatgaacagcatcctggaagtggacgacgaaggaggccggatgttcctgcgg
gtgctgatccatctgacgatgcacaactacgcccctctggtgtccggagcgctgcagctg
ctcttcaggcacttcagccagaggcaggaagtgctgcacaccttcaaacaggtgcagctg
ctgatctcgacgctggacgtggaaaactacaagctgattaaagccgacctggatcgcctc
cgcacgctggtggagaagtcggagctgtgggtggagaagaagagctcgggtggaggagac
gggaagaaagacaagaaggagaaaggggagggggcggcagaggacccatcgccaaagaaa
gagaagcagcagaaaggaaacgagaactaccagaacgtgaaagagattctggagcggctc
aataaaatgtgcagctctggagtctggaagaagcagcagcggctgctgaagaacatggga
gctcataaagtcatgctggacctgctgcaggtttcctacgacaagaacgacgtgaagatg
caggagatcatcaaatacactcacatgtttctgcagaagttctgcatggggaaccaggag
aaccaggcgctgctgcacaagaacctcaacctgttcctcaaccccgggctgcaggaggcc
gagacggtgcagcacatcttcagcaacaactaccagctgtgcagcgagatctcagagagc
gtgctgcagcacttcatccactgcctggccacgcacggccgccacgtccagtacctcaac
ttcctgcacaccatcatcaaggccgagggcaagtacgtcaagaagtgccaggacatgatc
atgaccgagctgacgaacgccggcgaggacgtggtcgtcttctacaacgacaaagcgtcg
ttcaacaccatgctggagctgatggccgagagcagggagggagtcggggagaagagcccg
ctcaggtaccacatctctctggtggagctgctagccgcctgcgccgagggcaagaacgtc
tacaccgagatcaaatgcacgtcgctgctgccgctggaggacgtggtgcgggtggtgacg
cacgaggactgcatcaccgaggtgaaaatcgcctacgtgaactttgtgaaccactgctac
gtcgacaccgaggtggagatgaaggagatctacacgtccaaccacatctggaagctgttt
gaggatttcaccgtggacatggcgcgggtctgcaacaagcgcgaaaaacgactgaccgac
ccggttctggagaaatacatcatcaacgtggttttcgacaccatcaccgccttcttcagc
tctcctttctctgagaacagcacgtctctgcagactcaccacaccatcgtggtccagctg
ctgcagtcgtccgtcaggctgctggactgtccctggctgctgccgctgcaccgcggacag
gtggaggcctgcatcaagacgctgtcgctgacagctaagaaccgctccatctctctccct
ctggagctggaggcgctgatcaacaacgtgttgtccagcttggccgtcaacaccctgaac
cgctccgcctacaagacgccgacccgcagcgccagacccgtcccctacgactacaagaac
atcatcgagaagctgcaggacatcatcaacaccctggaggagcggctgaagccgctggtg
aactcggagctgtcggtgctggtggacgtcctgcaccaaccggagctgctgttcctggag
ggaagcgacgcgcggcagcgctgcgagtccggcggcttcatctccaagctgatccagcac
accaaggcgctgatgtccgcagaggagaagctgtgcatcaaagtgctgaggacgctgcag
gagatgctcatcaggaccctggactttgatgagaagggaatgatgctgcgcaaagttctg
ctgcagaactacctgttctccaacaggaagagcaaccagaagaacgacctggctgaactg
ggagccgcaggtggcgaacaggagcgcgactgggcagcggtggcggccatccagtgccgt
ctggaccgggaaggaggaacgaagctgttcaccgacctggtgatgagctccaagaacgac
aagatcttccaggagagcatccagctggccatctgtctgctggagggaggcaacacggag
atccagaactccttctacaaactgatgatgggcgacaacaagtcggagaagttcttcaag
gttcttcatgaccggatgaaagaagctcagatggacattaaggcgacggtttctgtaaac
gttggtgaaatgacgcacaaggccaacgagaaggagctggaggccggaggacttcctctg
atggttcacggtcaaggcatcgccccggtaacggccgccgccgccatgccgacccagcag
gcagaggagcagcgggaggtggaggcggagatgggaccagcggtcaccatcatgaagccc
atcctgaggttcctgcagctgctgtgtgagaaccacaacaacaacctgcagaactttctg
cgttgccagaacaataaaaccaactacaacctggtgtgtgagacgctgcagttcctggac
atcatgtgtggaagcaccaccggcgggctgggcctgctgggcctctacatcaacgaatca
aacgtccacctgatcatccagaccctggagacgctcacagagtactgccagggcccctgc
caggagaaccagacgtgtatcgtgactcacgagtccaacggcatcgacatcatcacggcg
ctgatcctgaacgacatcagcccgctgtgtcggtaccgggtggagatggttctgcagctg
aaggacaacgcctccaagctgctgctggcgctgatggagagtcgtcatgacaacgagaac
gccgagaggatcctgttcaacctgcgaccgagggagctggtggatgtgatcaagaaggcg
taccagcaggagagcgagtgtgaggaggagcaggtggaggtggaggtgtcgccgcgggag
gtgggacacaacatctacatcctggcccagcagctggcgagacacaacaaagttctgcag
aacctcctgaagccgcccaagaacagcaaggagggcgaggaaggcatctcctccatgctg
accctccagagccgtcctctgtcccagatgttgaagtcttcggctccagctgaggtcgtg
gatcaggatcctctggactactacgaccagctcacgtctcagatcgagattgtgcgtgag
gaccgcagcatggagcagatcgtgtttcctgttcatcccatctgcgagtttctcaccgag
gagtcaaagctccgagtcttcaacaccacggagcaggatgagcaggggtcaaaggtcacg
cacttctttgagcagacttcgttcctgcacggagagatggagtggcagaagaagctgagg
agcatgccggttctgtactggttctccaggaggatgactctgtggggaaccatctccttc
aacctggccgtcttcatcaacctcatcatcgccttcttctacccctacgactctggccag
ggagcgatcgatgactccatgctgctgatgctgttctggatcctgaccgggctctccgtc
ctgggcttgttctccaagcagtacggcctgcagccgctcacgctggcgctgatcctcagg
tccatctaccacctgggcatcggaaacacgctcatcctgctcggatcgctcaacctgatc
aataaggtggtgtttgtggtgagctttgtggggaacaacgggaccttcatcatgggctac
aaagccatggtgatggatgtggagttcctgtaccacctggcctacgtcctcacctccacc
ctgggcctcttcgtccatgagctcttctacagcatcctgctgtttgacctgatctaccgg
gaggagacgctgttcaacgtgatcaagagcgtgacccggaacgggcgctccatcctgctg
acggcgctgctcgccctcatcctggtctacctcttctccatcctgggcttcctgttcctg
aaggaggatttcatcatggaggtggatccgctgctgcagctgtcagcagaccctcagcac
accgaggcggcccaggacttcctcaagtcgtgctccacagacggagtcagctgcaccgct
gagacgagcgtggagacggtggcggaggaggaaggggagcccagcacggagcgggcctgc
gatacgctgctcatgtgcatcgtcaccgtcctgaaccacggcttgagaaacgggggagga
gtgggagacgttctccgtaaaccatccaaaaacgagccgctgttcccggcgcgcgtcgtc
tacgacctgctcttctacttcgtcgtcatcatcatcgtcctcaacctcatcttcggcgtc
atcatcgacacgttcgccgacctgcggagcgagaagcagaagaaggaggagatcctgaag
accacatgcttcatctgcggtctggagagagataagtttgacaacaagacggtttcgttc
gaggagcacatcaagctggagcacaacatctggaactacctgtacttcatcgttctggtc
cgggagaagaaccagacggattacacgggtccagagagctatgtggcccacatgatcaag
aacaacaacctggactggttcccacggatgcaggccatgtccctggtggtaaccgacggc
gacggggagcagaacgagatgcggatgctgcaggacaagctggcgttgaccatgaaggtg
gtgacgacgctgacgggccagctgaacgagctgaaggagcagatgacggagcagaggaag
aggaagcagaggatgggctttgtggacgtccaggccggagcgagcggcgccgtgccgccg
agcgccgccggaggaaaccatcagatctacaaatcctaa
DBGET
integrated database retrieval system
