Xiphophorus hellerii (green swordtail): 116720235 Help Entry 116720235         CDS       T07363                                  Name (RefSeq) collagen alpha-1(IX) chain-like   KO K08131   collagen type IX alpha Organism xhe  Xiphophorus hellerii (green swordtail) Pathway xhe04510   Focal adhesion xhe04512   ECM-receptor interaction xhe04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:xhe00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     116720235  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     116720235   09142 Cell motility    04820 Cytoskeleton in muscle cells     116720235  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:xhe00535]     116720235 Proteoglycans [BR:xhe00535]  Extracellular matrix (ECM) proteoglycans   Others    116720235 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  116720235 NCBI-ProteinID:  XP_032419273 LinkDB All DBs Position 5:6774062..6798560 Genome browser AA seq 687 aa AA seqDB search MAVFRTHQEPLLVVLLQIVLICSAQRSLVGPTGPPGPPGIAGVPGVDGIDGERGEDSTLT GPVGLPGDNGKDGSSGAPGLPGADGPVGPPGDPGPLGPKGSKGEPGARGPAGEPGVGLDG TDGIPGTDGLPGELGKVGPPGAKGRRGAVGLPGPLGPRGPPAVYQGEELCPSACPAGLNG YSGLPGMKGHKGAKGESGEPGRQGHKGEEGDQGPAGEVGAQGLPGPAGARGLPGITGPKG DRGPRGKPGDVGPRGIQGAPGDPGQRGAIGESGQIGAQGERGPQGIRGVPGPKGEAGLSG PDGREGIPGLPGSRGLPGKSGAPGDAGTQGLPGLPGTYGQKGHSGTKGNSGDPGVVGLMG SPGKQGERGDQGEVGPVGPRGGPGERGERGPDGPPGLPGGRGSKGDPGFPGLPGPAGFRG QQGDRGPVGLDGPKGDQGPSGAEGIPGEGGEVGDQGEPGEKGSLGPPGETGNKGPEGGRG LPGKEGKPGQPGPRGMQGDTGVSGLPGHQGQAGKPPTDRHIKQVCMRVMQEQLAQLAASL SRPTSGIAGLPGPPGPPGPPGPSGENGFPGHSGSRGLPGLKGPPGLIGRKGPKGDQGDIG DRGPTLRGHKGEPGVPGLPGEPGRPAYGTNGRDGERGPRGVPGINGVPGPPGPAGRNGYC ELSQCIPPRVESPSLRKNSETKGPSDD NT seq 2064 nt NT seq  +upstreamnt  +downstreamnt atggctgtcttcaggacccatcaggagcctctgctggtggttttactgcagattgtgctg atttgctcggctcagaggagcctggttggtcccacaggcccccccgggccgccaggcatc gctggagtacctggagtcgacggaatcgatggtgagagaggggaagactccactctaact ggcccagtaggtcttcctggagataatggcaaagatgggtcttctggagctccagggctt ccaggagcagatggacctgtgggacccccgggagatccaggccctttgggcccaaaaggc tcaaaaggggaacctggagctcggggacctgctggagaacctggagtaggacttgatggg actgatggtattcctggcacggatgggctaccaggtgaactggggaaagtaggaccgcct ggagcgaaagggaggagaggtgccgttggtctgcctggtcctcttggtcctcggggacct ccagctgtttaccagggtgaggagctgtgtcccagtgcctgcccagcaggactgaatgga tattctggactcccagggatgaaaggccacaaaggggctaagggcgaatcaggtgagccc ggaagacaaggacacaagggagaggagggcgatcaaggaccggctggtgaagttggagct caaggactgccaggcccggctggagcaagaggccttccaggaataacaggccccaaagga gatcggggacctcgtggaaaacccggtgatgttggtccgaggggaattcagggagcacca ggggatccaggtcaacgaggagcaataggggagagcggacaaataggagcgcagggggaa cggggcccacaaggaatcaggggggtaccagggccaaaaggagaagctggcctttctggt ccagatggccgtgagggaatacctggactgcctggctcaaggggtcttccaggaaaaagt ggcgctccgggtgacgcaggcacacagggacttcctggtttaccaggtacatatggccag aaaggacacagcggcacaaagggtaactcaggagacccaggagttgtgggactgatggga tctccagggaagcaaggggagcgaggagaccagggggaagtgggacccgtgggacccaga ggaggacctggtgaacgtggggagagaggacctgatggaccgccaggattacccggaggc aggggaagcaaaggggacccaggctttccaggacttcctggtcctgccggtttccgaggc caacagggagacaggggtcctgttggtctcgatggccccaaaggagaccagggaccttca ggtgctgaagggataccaggagagggaggtgaagtgggtgaccaaggagaaccaggagag aaaggatcgctcggtccaccaggagaaacaggaaacaaaggacctgaaggcggccgcggg ctgccaggcaaagagggcaagccgggtcagccaggaccacgaggcatgcagggagacacg ggggtgtcgggactacctggacaccagggacaggcgggcaaaccaccaacagacaggcac atcaaacaggtctgcatgagagtaatgcaagagcagctggcccagttagcggccagcctg agcaggcctacatcaggcattgccggacttcccggcccccctggtccgcctggcccaccg ggtccatctggagagaacggtttcccaggccactctgggtcgagaggtctccccggtttg aagggtccacctgggctaattggccgcaaaggaccaaaaggtgaccagggggacattggg gatagagggcccacactcaggggacacaaaggggaaccaggagtccctggactaccaggt gaacccggccgaccggcttacggcacgaacggccgcgacggagagcgggggccgcgcggc gttccaggaatcaacggcgttccaggccctccgggtcccgctggcaggaatggctactgt gagctgtcgcagtgcattcctcccagggtggagtcacccagccttcgaaaaaactcagag acaaagggccccagcgacgactga

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