Xiphophorus hellerii (green swordtail): 116722308
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Entry
116722308 CDS
T07363
Name
(RefSeq) LOW QUALITY PROTEIN: TIR domain-containing adapter molecule 1-like
KO
K05842
toll-like receptor adapter molecule 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04217
Necroptosis
xhe04620
Toll-like receptor signaling pathway
xhe04621
NOD-like receptor signaling pathway
xhe05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116722308
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116722308
04621 NOD-like receptor signaling pathway
116722308
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116722308
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Gene cluster
GFIT
Motif
Pfam:
TRIF-NTD
TIR_2
Motif
Other DBs
NCBI-GeneID:
116722308
NCBI-ProteinID:
XP_032422430
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Position
6:complement(13205008..13207714)
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AA seq
563 aa
AA seq
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MNHTELENQGTGLRAVFDILEKAPSERLVSLTFQLGESPEDTIIHALCLIILQREAQALR
KLQMLEDNPLANHLAEKWHSGGGKLDDFGAHCSLFEAKTGESLSSLARVFKILSEQRLCE
PRLRNLAYKRAIFCECLNTSSLEYENFREEARAVCGPQFTEPMCFHSDLKSESSIDPCRK
ISEGKATLNIDASLDESANVHCLPTPLQDSPSEPSYPSHLEISLPPTISYQGDKAAAESP
GNPILNPSINENKTENVPEQIHCTSPQHTSTEISQFGAEKSIKIEEASMRSNESATQPLK
PYTQTKSSLSAATHVILPSSTGLKSTHISKVDEEEDEEDIFYAFVILHAPEDSDVAESMK
EKLEAVIGIEGATFSGDFAVPGKSTLRCVEDAVNNSAFTFLLLTRNFNSQMVEMKTNIAL
INSINNAHKFNTVIPLLPLENCMPKEQMPITLQTLMPLDERRNFEKKLKKAFNKAKIEKQ
RKIWVQEQRMRRMRLKEKERPSHYREQQLVLGAAVQREQDSGDPGLQRLAHNIHIENANY
IVIGNDSTMTVGVEGSADKGGLS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatacagaactggaaaatcaagggacaggactgagggctgtctttgacattttg
gaaaaggcaccttcagagcgattagtcagcctcacgttccagttgggtgagtctcctgaa
gacacgatcatacacgctttgtgtctgatcatcctccagagagaagcccaggccctgagg
aagctccagatgctagaggacaaccccctcgccaaccatctggctgaaaagtggcactca
ggcggaggtaaattagacgatttcggagctcactgtagcctgtttgaggccaagacggga
gagtctttgtcatcgctggctcgggtttttaaaattttgtctgaacaaaggttgtgcgag
ccacgtctaaggaatctggcttacaagagagccattttctgcgaatgcctaaacacaagc
tctctggaatatgaaaattttagagaggaagccagagctgtatgtgggcctcagtttaca
gagcccatgtgcttccactccgatctgaaatcggagtcttccatcgatccatgcaggaaa
atcagtgaaggaaaggcaactttaaatattgatgcttctctggatgagtctgcgaatgtt
cactgcctgcccacccccctgcaagacagtccgtctgagccttcatacccttctcatctc
gagataagtcttcctccaacaatttcttatcaaggggacaaagcagctgctgaatctcca
ggaaacccaatattaaatccttccatcaatgaaaataaaacagaaaatgtcccagaacaa
attcactgtacatctcctcagcacacatcgactgaaatatctcagtttggagcagagaaa
agcattaagatagaagaagcgtcaatgaggagtaacgagagtgcaacccagccactaaaa
ccctacactcagactaaatcaagcctatcggctgctacacacgttattcttccaagcagt
actggtctaaaaagcacacacataagcaaagtagatgaagaggaggatgaggaggacata
ttttatgcattcgttatcttgcatgctccagaagattcggatgtggcagagagcatgaag
gaaaaacttgaggcagtcatcggtatcgaaggggcaactttctcaggggactttgccgtt
ccaggaaagagcactctgaggtgcgtggaggacgccgtcaacaactctgccttcaccttc
ctgctgctcacgcgcaacttcaactctcaaatggtggaaatgaaaaccaacattgccctc
atcaactctataaacaacgcacacaaatttaacacggttatccccctgctgcctctggag
aactgcatgccaaaagagcagatgcccatcaccttgcagacattgatgccactggatgag
aggaggaactttgagaaaaaactgaaaaaggcttttaataaagcaaagattgaaaaacag
agaaagatctgggttcaggaacagagaatgaggaggatgaggttgaaggaaaaagagcgg
ccgagtcattacagggagcaacagcttgttcttggagccgccgtacaacgagagcaggac
agtggggatccagggcttcagcggctggcgcacaacattcacatcgaaaatgcaaactat
attgtgattgggaatgactcgacaatgactgtgggtgtagagggaagtgccgacaaaggt
ggcctaagttga
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