Xiphophorus hellerii (green swordtail): 116722332
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Entry
116722332 CDS
T07363
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116722332
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116722332
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
LRRNT
LRR_LRWD1
LRR_9
V-set
LRR_6
Motif
Other DBs
NCBI-GeneID:
116722332
NCBI-ProteinID:
XP_032422459
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Position
6:complement(12520400..12558352)
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AA seq
622 aa
AA seq
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MTDSPGPGGRALVPWPRVWKWVLASSLVSVIALTLPESSKACPPRCECSAQLRSVSCQRR
RLTNVPEGIPTETRVLDLSKNRLRWVQSGDLAPYPRLEEVDLSENLIATLEPNAFAALQN
LKVLKLRGNQLKLVPMGAFAKLGNLTSLDLSENKMVILLDYTFQDMRNLKQLEVGDNDLV
YISHKAFSGLLGLEDLTIERCNLTSISGQTLSYLHSLVTLRLRHLSITALEDQNFRKLSN
LRGLDIDHWPYLEYISPLSFQGLDLHWLFITNTNITTVPSNSFKNLVHLTHLNLSYNSIT
TLEPWAFKDLLRLKELIMVSTGLLTVESHALGGLRQIRVLNFSSNDLQTLEEGSFHSVNS
LETLRVDGNPLLCDCRLLWILQRRKTLNFDGRVPVCAGPVEVQGVSLSAFSDSALFDHFT
CQKPKIRNRKMQQVVAREGQPVSFVCRADGDPTPAIIWISPQRRRITAKSSGRITVLPSG
TLEIRYAQLTDSGTYICIATNAGGNDTYFATLTVRGQPLDSASAFFLNRSLYSGEYFNDT
NLNSTRVFLKFTLDLTTILVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRRNNFTVEYSF
RKSEPTTGSSTGGTRKFNMKMI
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgactgactctcctggtcctggtggtcgtgccttagtgccatggccgagggtgtggaaa
tgggttctggcttcctcgctggtctctgtcatagctttgactttgccagagagcagtaag
gcctgtcctccacgatgcgagtgttcagctcagctgaggtctgtgtcatgtcagcggcgg
cggctcacaaacgtcccagaaggcattccaactgagacacgggtcttggacctcagcaag
aaccggctccgttgggtacagtccggtgatctggcaccgtacccccggctggaggaagtg
gaccttagtgaaaacctcatcgccacattagagccaaatgcctttgccgctcttcagaat
cttaaagtcctaaagttaagggggaatcagctgaagttagtacctatgggggcatttgcc
aagctaggcaatctcaccagcctggatctaagtgagaataaaatggtgattttattggac
tacaccttccaagatatgaggaatcttaaacagctggaagttggagacaatgatctggtt
tatatttcccacaaggcattctctggacttctgggactagaagatctcacaatagagcgt
tgtaacctcacatccatctctggccagacgctgtcctacctccacagcctggtcactctt
cgccttcggcaccttagcatcactgccctggaggatcaaaactttcgcaagttgtctaat
ttgcggggtctggatatcgatcactggccataccttgagtatatctctccacttagtttt
cagggccttgatcttcactggctcttcatcaccaacaccaacatcaccactgtcccttca
aattcattcaagaacctggtgcacctcacccatctcaacttgtcctacaattccatcacc
acactagagccttgggccttcaaggacttgctgaggctaaaggagctcatcatggtaagc
actgggttgctgacagtggagtctcatgcccttggaggtctcagacagattcgagtactc
aacttctcctccaacgacctgcagactctggaagaggggtccttccactctgttaacagt
ctggagaccctcagagtggacgggaatcccttgttgtgtgactgccgtctgttgtggatc
ctgcaaagacgcaagaccctcaactttgacggcagagtgccagtgtgtgcaggcccggtg
gaggtgcaaggagtcagcctcagcgccttctctgactctgccctcttcgatcactttaca
tgccagaaacctaagatccgcaaccgtaagatgcaacaggtggttgctcgggaaggccag
ccagtgagctttgtatgtcgagctgacggagatcctacacctgccatcatctggatctca
ccacagcgtagacgaatcacagcaaagagttcaggtcgcatcactgttctccctagtggt
actctggagatccgctacgctcagctcactgacagcgggacgtacatctgcattgccaca
aacgctggaggcaatgacacctactttgccactctcacagtaagaggccagccactagac
tctgcctccgccttctttcttaaccgctctctgtacagcggggagtacttcaacgacaca
aatctaaacagcacacgggttttcctcaagttcaccttggacctgaccaccattttggtc
tcaacagccatgggttgcatcacgtttctcggagttgttctcttctgcttcctgttgtta
tttgtgtggagccgtggacgcggccagcgcaggaacaacttcacagtggagtactcgttc
cggaaatctgaacccaccacagggagctctacaggagggaccaggaagtttaacatgaaa
atgatatga
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