Xiphophorus hellerii (green swordtail): 116723885
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Entry
116723885 CDS
T07363
Name
(RefSeq) troponin C, skeletal muscle-like
KO
K12042
troponin C, skeletal muscle
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04020
Calcium signaling pathway
xhe04814
Motor proteins
xhe04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
116723885
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116723885
04820 Cytoskeleton in muscle cells
116723885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xhe04812
]
116723885
Cytoskeleton proteins [BR:
xhe04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
116723885
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
EH
AIF-1
EF-hand_11
SPARC_Ca_bdg
SAPC2_N
RTX_C
EF-hand_EFHB_C
CDI_toxin_EC869_like
Motif
Other DBs
NCBI-GeneID:
116723885
NCBI-ProteinID:
XP_032424981
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Position
1:4495322..4499546
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AA seq
160 aa
AA seq
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MTDAQQEARSYLSEEMLAEFKAAFDLFDTDGGGDISTKELGTVMRMLGQNPTREELDEII
EEVDEDGSGSIDFEEFLVMMVRLLKEDEAGKSEEELAECFRVFDKNGDGYIDRDEFALII
RSSGETITDDEIDELLKDGDKNSDGMLDFDEFLKMMENVQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcgcaacaagaggcccgctcctatctgagcgaggaaatgctggctgagttc
aaagccgccttcgacctgttcgacaccgacggtggcggcgacatcagcaccaaggagttg
ggtaccgtgatgaggatgctgggccagaacccgacaagagaagagttggatgaaatcatc
gaggaggtcgatgaggatggcagcggtagcatcgacttcgaggagttcttggtcatgatg
gtgaggctgctcaaggaggacgaggccggcaagagcgaggaagagttggcagagtgcttc
cgtgtgttcgacaagaacggtgacggatacatcgacagagacgagttcgccctgatcatc
cgcagcagcggggaaaccatcacagacgatgaaattgatgagctgttgaaggacggagac
aagaactccgatggcatgctggactttgacgaattcctcaagatgatggagaatgtgcag
taa
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