Xiphophorus hellerii (green swordtail): 116729795
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Entry
116729795 CDS
T07363
Symbol
ufd1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116729795 (ufd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xhe03009
]
116729795 (ufd1)
Ribosome biogenesis [BR:
xhe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
116729795 (ufd1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
116729795
NCBI-ProteinID:
XP_032434468
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All DBs
Position
12:5334003..5338395
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AA seq
311 aa
AA seq
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MFSFHHVFDHPMARGFPNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRL
NITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMV
ATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKA
VSIIECDMNVDFDAPLGYKEPERRTQNHDEPTEEEGDASSYADMDTGFRAFTGSGNRLDG
KTKGIEPSPAPLTASDIKRGIPNYDFKVGRITFIRNSRPQPRRNVEDDDAMNRFIAFSGQ
GQSLRKKGRKP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttccatcatgtgttcgaccacccgatggcccggggctttccgaaccgcttc
tccactcagtaccgctgctactcggtgtccatgctggctggacccaacgaccgctccgat
gtggagaaaggaggcaaaataattatgccaccttctgcgcttgatcagctcagcaggctt
aacatcacctatccaatgctgttcaaactcaccaacaagaactcagacaggatgacccac
tgtggagttctggagtttgtggcagatgaaggaatctgttaccttccacactggatgatg
cagaatcttctcctggaagaaggcggtctagttcaagtggaaagtgtcaaccttatggtg
gccacatattcaaagtttcagccacagagtcctgacttcctagacataacaaaccccaaa
gcagttctggagaacgctctgagaaactttgcctgcttgacgactggtgatgtcatagcc
ataaactacaatgaaaagatctacgagctgcgggttatggaaaccaaacccgacaaagct
gtatccatcatcgaatgtgacatgaatgtggattttgatgctcctttgggttacaaagag
cctgagcgacggactcagaaccacgatgaaccgacagaggaagaaggagacgccagtagt
tatgctgacatggacacaggattcagagctttcactggctctggaaatcgcctagatggg
aaaacaaagggaattgaacccagtcctgctcctctaactgcgagtgacatcaaaagaggt
attccaaactatgactttaaagttggccggatcaccttcatcagaaactccaggcctcag
cccaggagaaacgtagaagacgatgacgccatgaacagatttattgctttttcaggacaa
ggacagtcattgcggaagaagggcagaaagccttga
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