Xiphophorus hellerii (green swordtail): 116733899
Help
Entry
116733899 CDS
T07363
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116733899 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xhe03041
]
116733899 (crnkl1)
03036 Chromosome and associated proteins [BR:
xhe03036
]
116733899 (crnkl1)
Spliceosome [BR:
xhe03041
]
Complex B
Other components
Prp19-related factors
116733899 (crnkl1)
Complex C
116733899 (crnkl1)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
116733899 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
116733899
NCBI-ProteinID:
XP_032440773
LinkDB
All DBs
Position
15:complement(5852201..5858170)
Genome browser
AA seq
751 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDKEELND
YKLKKRKGFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDHRNITLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVAGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVDKARSIYERFVMVHPEVKNWIKYARFEERHGYVAHSRKVYERA
VEFFGEEYVDENLFVAFARFEETQKEFERVRVIYKYALDRIPKHQAQELFKNYTMFEKKF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDTDADTVREIYERAIANVP
PIQEKRHWRRYVYLWINYALYEELETKDPERTRQVYQACLELIPHKKFTFAKIWLLFAQF
EIRQKNLPGARKIMGMAIGKCPKNKLLKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDVERARAIFELAISQPRLDMPEVLWKSYIDFEIEQEQFENTRNLYKRL
LQRTQHVKVWISYAKFELSVDGPDRLQRSRQTYEDANKSMRSCEEKEERLMLLESWRDFE
REFGSDGTRERVRKLLPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKRQQAKDDEEEEEEEEEEEEEEEERPANPPEEEEQEEERSEEPAAAPDKPPEGEAQM
EKTYDDRDDSSSSESEEEDGGKKRSSEEDKE
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagcggcgggaaagcagcgcataccgaaggtggcgaaggtgaagaataaa
gctcctgcagaggttcagatcaccgctgagcagctgctcagagaggccaaagagagggag
ctcgagcttctgcctcctccgcccaaacagaagatcactgataaagaggagctcaatgac
tacaagctgaagaagaggaagggctttgaagacaacatcagaaagaaccggaccgtcatc
agtaactggattaaatacgcacaatgggaggaaagcctgaaggagatccagagagctcgg
tccatctacgagcgagcgctggacgtcgatcacagaaacatcactctgtggctgaagtac
gcagagatggagatgaagagccgccaggtgaaccacgcccgcaacatctgggacagagcc
atcaccatcctgccccgggtcaaccagttctggtacaaatacacctacatggaggagatg
ctgggcaacgtggccggctgcaggcaggtgtttgagcgctggatggagtgggagccggag
gagcaggcctggcactcctacatcaactttgagctgcgctataaggaagtggacaaagcc
cggagcatctatgagcgattcgtcatggtccaccccgaggtgaagaactggatcaagtac
gctcgcttcgaggagaggcacggctacgtggcgcacagcaggaaggtgtacgagcgagcc
gtggagttcttcggggaggaatacgtggacgagaatctgtttgtggccttcgccaggttc
gaggagacccagaaggagtttgagcgggtccgagtcatctacaagtacgccctggacagg
atccccaagcatcaggcgcaggagctcttcaagaactacaccatgtttgagaagaagttc
ggagaccgcagaggaatcgaggacgtcatcgtcagcaagagaaggttccagtacgaagag
gaggtcaaggcaaacccacacaactacgacgcctggttcgactacctgcgcctggtggag
agcgacacggacgccgacacggtgagagagatctacgagagagccatcgccaacgtgccg
cccatccaggagaagagacactggaggcgctacgtctacctgtggatcaactacgccctg
tacgaggagctggagaccaaggaccctgagaggacgaggcaggtctaccaggcgtgtctg
gagctcatccctcataaaaagttcaccttcgcaaagatttggctgctctttgcccagttt
gagatccgacagaagaacctgccaggagccagaaagatcatgggcatggccatcgggaaa
tgtcccaagaacaagctgctgaagggctacatcgagctggagctgcagctgcgagagttc
gaccgctgcaggaagctgtatgagaagtacctggagttcagcccggagaactgcaccacc
tggatcaagttcgccgagctggagaccatcctgggcgacgtggagcgagcccgcgccatc
tttgagctcgccatcagccagcccagactggacatgcctgaggttctctggaaatcctac
atcgactttgagatcgagcaggagcagtttgagaacacgaggaacctctacaagaggctg
ctgcagcgcacgcagcacgtcaaggtctggatcagttacgccaagttcgagctgtcggtg
gacggacccgaccggctgcagcgcagccgccagacctacgaagacgccaacaagagcatg
aggagctgcgaggagaaggaggagcgactgatgctgctcgagtcctggagggactttgag
agggagtttggctccgacggcaccagggagcgagtccggaagctgctgccggagaaggtg
aagaagaggaggaagctgacggccgaggacgggtcggacgccggctgggaggaatactac
gactacatcttccctgaggacgccgccaaccagcccaacctcaagctgctcgccatggcc
aagatgtggaagaggcagcaggccaaggacgacgaagaggaggaggaggaggaggaggaa
gaggaggaggaggaggaggagcgtcctgcaaaccctccagaggaggaagagcaggaggaa
gagcgctctgaggagccggcagcagctcctgacaaaccgccggagggcgaggcccagatg
gagaaaacgtacgacgaccgagacgacagcagcagcagcgagagtgaggaagaggatgga
gggaagaaacggagcagtgaggaagacaaagagtag
DBGET
integrated database retrieval system
