Xiphophorus hellerii (green swordtail): 116734265
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Entry
116734265 CDS
T07363
Symbol
snx9
Name
(RefSeq) sorting nexin-9 isoform X1
KO
K17923
sorting nexin-9/18/33
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116734265 (snx9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116734265 (snx9)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
116734265 (snx9)
Membrane trafficking [BR:
xhe04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
116734265 (snx9)
Macropinocytosis
Sorting nexins
116734265 (snx9)
Domain-containing proteins not elsewhere classified [BR:
xhe04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
116734265 (snx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_1
SH3_9
SH3_2
Vps5
Snx8_BAR_dom
BAR
Motif
Other DBs
NCBI-GeneID:
116734265
NCBI-ProteinID:
XP_032441442
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All DBs
Position
15:13040084..13057795
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AA seq
628 aa
AA seq
DB search
MALKAQVLYDFAAEPGNNELTVREGETITITNKGIGGGWIEAQNSRGEVGLVPEDYIEFK
NEFPAFPAASTAPPSNAENVAYQDLSVFDAFAPLSTAAQYQVESGALNPVPDTPDTPVTP
FFPSPEEASNGNDPWSAWNADPSGGTNNNWASNAEGTQTGKSAADPWGNVSQGHPQAYQG
PAKDIYPYPYLIDYTAAEDDEWDDEWDDMKSNAVYTESGEAGGIQRGGMHASSMKISLNK
FPGFSKSGPELYLLCKQIAKGKDKLSIYVGEVGPVWSYPETQIDCIVADPKKGSKMYGLK
SYIEYQITPNTTNRPVNHRYKHFDWLYERLLDKFGSAIPIPSLPDKQVTGRFEEEFIKMR
MERLQGWMSRMCRHPVISGSDVFQLFLTYKDEKDWKTGKRKAEKDETVGVMIFTTIEPEA
ADLDPSEVEQKCEQFSKFTKAMDDSVKEILTVGNEHWKRCTGPLPKEYQRIGKALQNLST
VFTSSGYQGESTLTDALTAAGKTYEEIAQLVAEQPRKDLHFLMETNNEYKGLLGCFPDTI
GVHKAAIDKVKEGDKLVAANKITTPDKVAMSKRLSTMSYTLQAEMNHFHSNRIYDYNRVM
QQYLEEQVKFYETIAAKLKQAHGQFTTM
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaaaggcacaggttttatatgacttcgccgctgagcccggcaacaatgagctg
acagtgagagaaggcgagacaatcactatcaccaataagggtattggagggggttggatt
gaagcacagaattcaagaggagaagttggactggtgcctgaagattacattgagttcaaa
aatgaatttcctgcatttccagcagcatcgacggcacccccttcaaatgcagaaaacgtc
gcatatcaggacctttctgtctttgatgcatttgcacctctatcaacagctgcacaatac
caggtggaatctggggctttgaatcccgttccagacaccccagacaccccagttacccct
ttcttcccgtcccccgaggaggccagcaatggtaatgatccctggtcagcgtggaatgca
gacccttcagggggcacaaacaacaactgggcctctaatgcagagggcactcagactggg
aagagtgctgctgacccctggggcaatgtatcacagggtcaccctcaggcttaccaaggc
ccagccaaagacatctacccatatccttaccttattgattacacagcggcagaggatgat
gagtgggatgatgaatgggatgacatgaaatcaaatgccgtctacacagaatctggggaa
gctggtggaatacagagaggaggaatgcatgcttcgtcaatgaaaatatccctcaataaa
tttccaggattctccaagtctggtcctgagctctaccttctgtgcaaacagattgcaaaa
gggaaagacaagctgtcaatatacgtgggtgaggttggtcctgtatggtcttacccagaa
acccagatagactgcatcgtagctgatcccaagaaagggtccaagatgtacggcctcaag
agctacatagagtaccaaatcacacccaatacaacaaaccgacctgtcaatcatcgatac
aagcacttcgattggctctacgagagactcctggataaatttgggtcggccattccaatt
ccctctttgccagacaagcaggtgacagggcgttttgaggaggagtttattaagatgcgc
atggagcggttgcagggttggatgtccaggatgtgcagacaccctgttatttctggcagc
gatgtgttccagcttttcctcacatacaaagatgaaaaggactggaagacggggaagaga
aaagcggaaaaagatgagacggttggagtgatgatcttcaccacaatcgagccagaagct
gcagacctggatccttcagaagtggagcagaaatgtgagcagttcagtaaatttaccaaa
gccatggacgacagcgtgaaggaaatcctcactgtgggaaacgagcactggaagagatgc
acaggacctctgccaaaggaataccagagaataggaaaagccttgcagaacctctctact
gtcttcacaagcagtggataccaaggtgagtcgactctaaccgatgccttgacagcggct
ggaaagacctacgaggagatagcccagctggtggcagagcagcctaggaaagatcttcac
ttcctcatggagaccaataatgaatataagggtctccttggatgcttcccagataccatt
ggggtccataaggcagctatagacaaggtgaaggaaggggacaagctggtggctgccaac
aaaattaccactcctgacaaagtagccatgtcgaaacgtctcagcaccatgtcttacact
ttacaagctgaaatgaaccacttccatagcaaccgtatctacgactacaaccgggtcatg
cagcagtacctggaggagcaagtcaagttttacgagacgattgctgcaaagctgaaacaa
gctcatggtcagttcactacaatgtga
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