Xiphophorus hellerii (green swordtail): 116735517
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Entry
116735517 CDS
T07363
Symbol
setd1a
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00310
Lysine degradation
xhe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116735517 (setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xhe03036
]
116735517 (setd1a)
Enzymes [BR:
xhe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
116735517 (setd1a)
Chromosome and associated proteins [BR:
xhe03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116735517 (setd1a)
HMT complexes
COMPASS/SET1 complex
116735517 (setd1a)
COMPASS/SET1 complex (yeast)
116735517 (setd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
116735517
NCBI-ProteinID:
XP_032443351
LinkDB
All DBs
Position
16:complement(4476289..4509642)
Genome browser
AA seq
2166 aa
AA seq
DB search
MDPDSGTETQKAVSLQWESYKLVQDPAIRRVTQKVYRYDGVHFSVPDSGFPPVGELRDPR
PRRLWSRYTEISLPVPKFKLDEFYVGPIPLKEVTFARLNDNIKEPFLAEMCSKFGEVEEM
EILFHPKTRKHLGLARVLFTNTRGAKDTVKHLHNTSVMGNIIHAQLDIKGQQRQKYYDLI
VNGSYTPQTVPLGGKALTDSVQSQTPAQPDTSEIRRRYSSELAVLAAGVHALTSGSMTPC
SAETGFGEQRVDTPPSSLPGPYTPSSTASSQGGGGTPYSSRSGTPFSQDSGYSGSRHPNY
NAGSLSSGYPPQDMLPSSSSSSAVSSSVGGFKVSRYPDEQDPSLYHRGRPSYPPTTSYRP
NEPPGYAPYQNLGGPGSHMAHHSSMPPPPICNQYDQPLLPDRERSESAGRYAAAGVGSRR
SSYHHQQDSNSSSKYHSHHSHHHSDRRDDRGYRRDSVGSRSGDHGHQRHRNHHHSHNHHG
SRRRSSHDRDRDRDADYANSSDPRYNSNSYRSSSNSMSPPPSSYSAYASSKDPAPTPPQD
GSSRSAGSTLAEKAGSDKDHHGALPPPPPPPPPPLPPASVIAAAVAETLGTLDFNQDSPA
REDQWTKPKRRPTTPPAPPKTPPPSSPSQPTTAKSSSNSPSSASLPHHLSSSSSSPPPPH
RDSSPEPDSTNESLPFVYHSSSLDSRIEMLLKEQKAKFSFLASDEEDEEDRKEEKQRSRV
REGAERRSDAAKEQEHRGDNGEKDHRKKGERDREGHRGRKRGKGEGRKSPTVLAAGTQPS
ENYSPHIVPPEEPPPPVGIDATEALQQDDPQAGSADPGVRTGAHTPPPFNGQSQASPHSS
GEDMEISDDDAEETTTITTVTTHQPTVASGSTPSSSQAAAAGLSQPADPSSSPPPISDSS
QHFGTSMHPPIPSYPPHLPPPPPPGYSLQPPPPPGIPPLPHMELHPEYPPPMPHHMYDYA
TSMELMNQYSGGAPMSFQMQTHMLSRLHQMRLSSSNGTAGPSEAATGDYASYHLHSMPPP
HTHHPYMDQEGNGAGAHYDQDHRYMPPHMSYPYHEPHSTQIPPPPHHSIPPPHSGWPPHV
LPPHFQSYLPPPGYGTMLTGEGDEYSASGEALPMMAENPHEATVQMVLASLIQEMKNIVQ
RDLNRKMVENVAFATFDEWWDRKETKAKPFQTMVRGVSALRDDEKKEEKVNRPREPLMSL
VDWAKSGGVEGFSLRGALRLPSFKVKRKEPQEFKEGDLKRPRPSTPPDEDDEAGRMPEAD
RHAADRDNKRRKKKPRSRKPWELDSEGEETSDGSSSEKEDEEVESEKESDDDGLSSDSDD
ESLSSSSEGSSSSASSSSSSSEDEEEEEGELVESAGPDSMDESTMDSTTEKEDDRHIVAG
AVPKVDIKKGVSKEIKADIPAAPLSPLGPRPSSPNAFVPPLKKRRKTVSFSTDENDSKPL
LPAPSPTQPGSEAPPTADKPLDSPIALTPPPSCRPAHSIQLLPFASKPGEGNALIVPPPS
RNQDPEESKKTPLAPSPKSPGKRVASKDSPRPASAPVMVCRTVQNLPLDHASMCRMAFEE
APAAAPGNKRSRGRTRTPSMCHAVREDEEDEEDGEQRLRIREQVGASSLLQLAGADLSVL
ADVALKMDPEAGDSEETETSDEAEEQKMEGDPFSLESLALVMSPGGVVVLLEHNYCKPPA
LAAATVASGARKPAARQDASVLVSADLNSISGVLEAPEEVIGEAAPPRGDKGEYFSPVGD
LGDSDDNRQMAPVSPSPKRKNYVGKGLEVDQDKSEKRKRKDKENLEPHRTKKQKEPLGKK
QRKRKLEESDFEEDVDVEELESGELSSSDTENEVTEGMRKSERLFLQEAGVTSSQRWPKP
RPAPEPLLLKFENRSEFEQMTILYDIWNSGLDGEDLSFLKKTYEKLLQDDHSSDWLNDTH
WVNHTVTNLPNPRRKKKSADGQLREHVTGCARSEGYYAISRKEKDVYLDLDLPEQVIREV
ENVDSSGANRVLSERRSEQRRLLTVIGTTAVMDSDLLKLNQLKFRKKKLRFGRSRIHEWG
LFAMEPIAADEMVIEYVGQNIRQMVADNREKRYAQQGIGSSYLFRVDHDTIIDATKCGNL
ARFINHCCTPNCYAKVITIESQKKIVIYSKQPIAVNEEITYDYKFPLEENKIPCLCGTEN
CRGTLN
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atggatccagacagtgggaccgaaacacagaaagcagtcagcttgcagtgggaaagctac
aaactcgtccaggacccggccattcggcgggttacgcagaaggtttacagatatgacgga
gtgcatttcagtgttccagactccgggtttccccctgtgggagaactccgggaccctaga
ccccggagattatggtcgaggtatacagaaatatccctaccagtgccaaagttcaagctc
gatgagttctacgtgggccccatacccctcaaagaggtgaccttcgccaggctcaatgac
aacatcaaggagcctttcctggcagaaatgtgctccaagtttggtgaagtggaggagatg
gagatcctgtttcatcccaagaccaggaagcacttgggtctggccagggtgttgttcacc
aacacgagaggagcgaaggacacagtcaagcatttgcacaacacctctgtcatgggaaac
atcattcatgctcagctagatataaaaggtcaacagcggcagaagtactacgacctcata
gtaaacgggtcctacactcctcagacggtgccgcttggagggaaagctttgacggatagc
gttcagtctcagacgccggcgcagccggatacgtcggaaatccggcggaggtattccagt
gagcttgcggttttggctgcaggagtccacgccctgacctcgggaagcatgacgccgtgt
tctgctgaaaccgggtttggagaacagcgtgtcgacacgccgccttcgtcgttacccggt
ccatacacgccgagctccactgcttcgtctcaggggggcggagggacaccttacagctcc
agatctgggactcctttctcacaagactcaggctactccggcagcaggcatccgaactac
aacgcaggctctttgagcagcggctatcctccccaggacatgttaccatcttcatcttca
tcgtccgcagtctcgtcttctgttggaggttttaaagtgtctcgttaccccgatgaacag
gacccatcactgtaccaccgaggtcgtccttcgtaccccccgaccacatcgtaccgtccc
aatgagccgccgggctacgcgccctaccaaaacctcggaggtcccggctcacacatggcg
catcactcctcaatgcctccaccgccgatttgcaaccagtacgaccagcctctgctgccg
gacagggagcggagcgaatcagcggggaggtatgcggccgcgggggtcggttctagaagg
tcgtcctaccatcaccagcaagactcaaactcctcctcgaagtaccattcccaccactcc
caccaccattcggaccgccgggacgaccggggttaccggcgagacagcgtgggctcccgc
tctggcgaccacggccaccagcggcaccgcaaccaccaccactctcacaaccaccacggc
agtcgcagaagaagcagccacgaccgggaccgcgaccgagacgccgactacgccaacagc
tccgaccccagatacaactccaactcctaccgatcgtcgtccaacagcatgtcgccgccg
ccgtcatcttactcagcgtacgcctcctccaaagatcccgccccgaccccgccgcaggat
ggttcctcccgttcggcgggttcaaccctggcagagaaagctgggtctgataaggaccat
cacggcgctttgcctcccccgccgcctcctccgccgccgccgctcccaccggcctccgtt
attgcagcagccgtcgccgagacgctgggaacgctagactttaaccaggacagtccggcc
cgcgaagaccagtggaccaaacccaaacgccgtcccaccacgccacccgccccgcccaaa
acgccaccaccatcctccccttcccaacctactaccgccaaatcttcctccaactctccc
tcctcagcctcccttcctcaccacctttcctcttcctctagctcccctccacctcctcat
cgcgactcctctccagagccggactccacaaacgagagtttgccgtttgtctaccacagc
agcagcctggactctcgaatcgagatgctcctgaaggaacaaaaggccaagttttccttc
ctcgcttctgacgaggaagacgaggaggacaggaaagaggagaagcagaggagcagagtt
agagagggagcggagcgaagaagtgacgctgcgaaggagcaggagcacaggggggacaac
ggggagaaggatcacaggaagaagggggaaagagacagagaaggacacagagggagaaaa
cggggaaaaggagaagggaggaagagtccgactgtcctcgctgcggggacacaaccctcc
gaaaattattccccccacatcgtacctccagaggaacctccgccccccgttggcatcgat
gctactgaagctctgcagcaagacgatcctcaggctggttctgctgatccgggggtccgg
accggagcgcacacgccgccgccgtttaacgggcagagccaggcgtctcctcattcttct
ggcgaagacatggagatctcagacgacgacgctgaggaaacgaccaccataacgaccgtc
acgactcaccagccgacagtcgcctcaggatcaacaccgtcatcctcacaagccgccgcc
gccggactctcacagccggcagacccctcatcctctccgccccccatctctgattcctca
cagcactttgggacgtccatgcacccgccgattccttcctacccgccccatttaccgccc
cctcctccgcccggctactcccttcagccgccacctccgcctgggattccacctcttcct
cacatggagctacaccccgagtatcctcccccgatgcctcaccacatgtacgattatgcc
acctccatggagctgatgaaccagtacagcggtggagccccgatgtcgttccaaatgcaa
acccacatgctaagccgcctgcatcagatgcgtttgtcgtcgtccaatggcacggcaggg
ccgagcgaggctgcgaccggagactacgcatcgtaccatcttcactctatgccaccgcct
cacacgcaccacccctacatggaccaagagggcaatggggcgggggctcactacgaccag
gaccacagatacatgccaccccatatgtcatacccctaccatgaaccccacagcactcag
ataccacctcctccacaccacagcatcccgcctccgcactctgggtggccgccacacgtc
ttaccgcctcacttccagtcctacttgccgccgcccggctacggcaccatgctgactggg
gagggagacgagtacagcgcctctggggaggcattgcccatgatggcggagaatccgcac
gaagcgacggttcagatggtgctggcctctttgatccaggagatgaagaacatcgtgcag
cgggacctgaaccgcaaaatggtggagaatgtcgccttcgccacttttgatgagtggtgg
gacaggaaggagaccaaggccaagcctttccagacgatggttaggggagtgtctgcctta
cgggacgatgaaaagaaagaggaaaaggtcaaccgtcctcgagagcctctgatgtcactt
gtggattgggcaaaaagtgggggcgtggaggggttttctcttcgtggagcgctgcgatta
ccttcattcaaggtgaaaaggaaagaacctcaggagttcaaagagggagacttaaagagg
cctcggccttcaactccaccagatgaagatgatgaagctgggagaatgccagaggcagac
aggcatgcagctgatcgggacaacaagaggaggaaaaagaagccaagaagtcgtaaaccc
tgggagcttgacagtgaaggagaggaaacatccgacggctcatcgagcgagaaggaggac
gaagaagtggaaagtgaaaaggaatcagatgatgacgggctcagtagtgacagcgatgat
gagagcctgtcttcgtcctctgaaggttcttcctcgtcggcgtcctcctcttcgtcctct
tctgaggacgaggaggaggaggaaggggagctagtggaaagtgccggtccggactccatg
gatgagtcaacaatggacagcacaactgagaaagaggatgacaggcatattgttgcaggt
gctgttccgaaagtcgacatcaaaaaaggtgtttctaaggaaatcaaggccgatatcccg
gcggctcctttgtctccactcggccctcgcccttcgtctccaaacgctttcgttcctcct
ttgaagaaacgcaggaagactgtttccttctccacagacgagaacgacagcaaacccctg
ctcccagctccgtcgccaacgcaaccgggaagcgaggctccgcccactgccgacaagcct
ctggactcccccatcgctctcacgccgccgccttcctgccgacccgctcacagcatccag
ctgcttcccttcgcctcgaaacccggcgaaggcaacgcgctcatcgtcccgccgccgagc
cggaaccaggaccccgaggagtccaagaagacgcccctggctccctccccgaaatccccc
ggcaagcgggttgcgagcaaagactcgccccgacccgcctccgctccggtcatggtgtgc
cgcaccgttcagaacctgccgctggaccacgcctcgatgtgtcgcatggcattcgaggaa
gcccctgcagcggcgccgggcaacaagcggtccagaggccggacccggacgcccagcatg
tgtcacgccgtcagggaggatgaggaggacgaagaggacggcgagcagcggctgaggatc
agggagcaggtcggcgcgtccagccttctgcagctggccggcgcggacctgtcggtgctg
gcggacgtggcgctgaaaatggacccggaagccggggactcagaggagacggagacgtcg
gacgaggctgaggagcagaagatggagggcgacccgttctccctggagtcgctggctctg
gtgatgagccccggcggcgtcgtcgtacttctggagcacaactactgcaaacctccggcg
ctcgccgccgccaccgtggcatccggcgccaggaaacccgccgccaggcaggacgcgtcc
gttttggtgtcggcggacctcaactctatctctggagtcctggaggcgccagaggaggta
atcggagaggcggcgccgcccagaggagacaaaggcgaatacttctccccggtgggagat
ctgggtgactctgatgataacagacagatggcgccggtgtctccgtcaccaaagaggaag
aattacgtcggcaaaggcttggaggtcgaccaggacaagagcgagaagaggaagaggaaa
gacaaggagaacctggagccgcatcgcacgaaaaagcagaaggagccgctcggcaagaag
caaaggaagaggaagctggaggaatcagattttgaggaagatgttgacgtggaggagctg
gagtctggagaactttccagttcggacactgagaacgaagtgactgaaggaatgaggaag
agcgagcgtctctttctgcaggaggccggggtaacgtcgtcgcagcgctggcccaaacct
aggccggcgcctgagccgctacttttaaagtttgaaaaccgcagcgagtttgagcaaatg
accatcctgtatgacatctggaactcgggtctggacggggaagacttgagtttcctgaag
aagacatacgagaagctgctgcaggacgaccacagctctgactggctcaacgacacccac
tgggtcaaccacactgtaaccaatttgccgaacccccggcgtaaaaagaagagcgcggac
ggccagctgcgggagcatgtgacgggatgcgccaggagcgaaggctactacgccatcagc
cgcaaggagaaggacgtctacctggacctggacctgcctgagcaggtcatacgggaagtc
gaaaacgtcgacagctcgggagctaatcgggtgctatcagagaggcgctcagagcagcgg
cgtctcctcactgtcatcggaaccacagccgtcatggactctgacctacttaagctgaac
cagcttaagttcagaaagaagaagctgcgatttgggcgcagcaggatccatgaatggggc
ctgtttgccatggagcccatcgccgccgacgagatggtcatcgagtacgtcggtcagaac
atcagacagatggtggccgacaaccgggagaagcggtacgctcagcagggcatcgggagc
agctacctgttcagagtggaccacgacacaataatagacgccaccaagtgtggcaacctg
gcgcgcttcatcaaccactgctgcactccaaactgctacgctaaagtcatcaccatagag
tctcagaagaagatcgtgatctactccaagcagccgatcgccgttaacgaggagatcacc
tacgactacaaattccccctggaggagaacaaaatcccctgcctgtgtggaacggagaac
tgccgcggaacgctcaactag
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integrated database retrieval system