Xiphophorus hellerii (green swordtail): 116736607
Help
Entry
116736607 CDS
T07363
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xhe02000
]
116736607
Transporters [BR:
xhe02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116736607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
RhodobacterPufX
Motif
Other DBs
NCBI-GeneID:
116736607
NCBI-ProteinID:
XP_032445060
LinkDB
All DBs
Position
17:complement(5615996..5629986)
Genome browser
AA seq
597 aa
AA seq
DB search
MGKTGQTTVDLNSPSEVKQAVPSEDLVSTAPPADQKKEKEVPPDRGSWKGKFDFLLSCVG
YAIGLGNVWRFPYLCGKNGGGAFLIPYFMTLVFAGIPLFFLETALGQFTSVGGLGVWKLI
PMMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFNSFSSELPWQSCDNPWNTESCFSNYSL
TDTTNLTSAVTEFWERNMHQMTDGLETPGELRWPLVGTLALAWVLVYFSIWKGVEWTGKV
VYFSATYPYFMLFILFFRGVTLPGAIDGILFYITPDFNKLIRSEVWLDAATQIFFSYGLG
LGSLIALGSYNTYNNDVYKDSIIVCCINSCTSMFAGFVIFSIVGFMSYITKKPVQELAAS
GPGLAFLAYPQAVTQLPMSSLWAILFFSMLMMLGLDSQFCTVEGFITALMDEYPLVLRKR
KKLFILIVCFISFVIGFSNITQGGLYVFKMFDYYSASGMCLLFLVFFETISISWFYGAER
FYKNIEDMIGYRPCVWWKLCWLFFTPLICLGVFTFSAFEMTPLTLGKYVYPLWGQVIGWF
MALSSMILIPGYVIYMFCTTKGSIKQRWRKMTTTQEDEKSSGLEEFTHTGSMDEAPV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaccgggcagactacagtggacttaaactccccgtcagaggtcaaacaagcc
gtcccttctgaggacctggtctccacagcgccccctgcagatcaaaagaaggaaaaggaa
gttcctcctgacaggggaagctggaaggggaaatttgacttcctgctgtcatgtgtagga
tatgccattggcttaggaaatgtgtggcgatttccttatttgtgtggcaaaaatggtgga
ggagccttcctgatcccgtactttatgaccctggtgtttgctgggatacctctgttcttc
ctggaaacagctctgggacagttcacctccgtgggggggttaggggtgtggaagctcatt
cccatgatgaaaggtgttggtttggctgctgttgtcctgtcgttctggctaaacatctac
tacataatcataattgcctgggctctttactatttatttaactccttcagctcggagctg
ccttggcagagctgtgataacccctggaacaccgaaagctgcttctccaattacagcctg
acagacaccaccaacctgaccagcgccgtcacagagttctgggaacgtaacatgcaccag
atgaccgacggtctggagacgccgggagagctgcgctggcctttagtgggcaccctggcg
ctggcctgggttctggtctacttctccatctggaaaggggtagagtggacgggaaaggtg
gtttatttttccgccacctacccctacttcatgctgttcatcctgttcttccgcggcgtc
acgcttcctggagccatcgacggcatcctgttttacatcactcctgacttcaataagcta
attcgatctgaggtgtggctggacgcagcgactcagatcttcttctcctacggattgggc
ctgggctcgctcatcgcgctcggaagctacaacacttacaacaacgacgtctacaaggac
tctatcatagtatgctgcattaactcgtgtacaagcatgtttgctgggtttgttatcttc
tctattgtaggattcatgtcctacatcacaaagaaaccagtgcaggaactggcagcgtcg
ggtccgggtttggcatttcttgcctatcctcaggctgtcacccagcttcccatgtcttcc
ctctgggccatcctcttcttctccatgctcatgatgctcggcttggacagccagttttgc
acagttgaaggattcatcacagccctcatggatgagtatcccttggtgttgaggaagagg
aagaagctcttcatcctcatcgtttgtttcatctccttcgtcattggcttctccaatatc
actcagggcggtctgtatgtgttcaagatgtttgattactactctgccagtgggatgtgt
cttctcttccttgtcttctttgaaaccatttccatatcctggttttatggagctgaacga
ttttacaaaaacattgaggacatgatcggttatcggccgtgtgtctggtggaagctttgc
tggctcttcttcacgcctctgatctgcctgggggtcttcaccttcagtgcctttgaaatg
acgcccctgacgttggggaagtatgtgtatccgctgtggggtcaagtgattggatggttt
atggctttgtcttcaatgatcctcatcccaggttacgtgatctacatgttctgcactacc
aaaggcagcatcaaacagcgttggcggaagatgacaactacccaggaggatgagaagtca
tcggggctggaagaattcacacacacaggaagcatggatgaagctcctgtgtag
DBGET
integrated database retrieval system
