Xiphophorus hellerii (green swordtail): 116737625
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Entry
116737625 CDS
T07363
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xhe04040
]
116737625
Ion channels [BR:
xhe04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116737625
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
BAR_4
Motif
Other DBs
NCBI-GeneID:
116737625
NCBI-ProteinID:
XP_032446796
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Position
18:9155966..9165759
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AA seq
919 aa
AA seq
DB search
MAQLFYKRTDNSTYNDRLPLRIVRAEAELSPMEKVYLGAVERGDYASVKQALEEAEIYFR
ININCIDPLGRTALLIAIENENLEIIELLLSYNIHVGDALLHAIRKEVVGAVELLLNHKR
PRGEKQIPPILLDKQFSDFTPDITPIILAAQTNNYEVIKLLLQRGVSVPLPHAVRCNCMD
CMSNTDVDSLRHSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELKELSTVENEFKSE
YEELSQMCKQFAKDLLDQTRSSKELDIILNYRDDIDPLLDENNNDLARLKLAIKYSQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAVKLITCAFIGLLFPLLSVFYLLFPTTRYGQFIR
KPFIKFICHTSSYLTFLILLFLASQHIDSGDPECRAAYFQGPAPTTVEWLILPWVIGFVW
AEIKQMWESGLKNYMDDWWNIMDFIMNSLYLATISLKIVAYTKYRGYKTRDSWEMLHPTL
IAEALFAIANIFSTLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYYYYATEGEKNCTGIRCQTQNNAFSTLFETLQSLFWSVFGLISLYVTNVKANHTITKF
VGSTMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLPS
PFNIIPSPKSVFYLLRWIKTNVFKKPGKKSMHTFETLGVRAAENVRLNHEYQAVLKNLVK
RYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKSKPHSGGTSPVASTTLAYPG
NSFKYCRKPAASERKKVSHMLEAKSPTILQNKAANTANSLGSDYQNNCSVVVWSAEKTEI
EISKDQSKGECSPKQEQTSFLKCDETNSLFVASGRQDKALSGKADVEVSQNINTETQEIG
FSCTVLSKEVTNGPKKKQN
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggctcaactattttacaagagaactgacaactccacatacaacgaccgtctcccactg
cggattgtgcgggcagaggctgagctctctcccatggagaaggtctacctgggggccgta
gaaagaggggactacgcgagtgtaaaacaagcgttagaggaggctgagatctactttaga
atcaatatcaactgcatcgacccgctgggacgcacggccctccttattgccatcgaaaac
gagaacctggagatcatagagcttctgctcagctataacatccatgtgggtgatgccctg
ctgcacgccattcgtaaggaagtagtgggggccgtggagctgcttctcaatcacaagagg
ccacgtggagaaaagcagatccccccaattctgttggacaaacagttttcagacttcact
ccagacattactccaatcatccttgcagctcagacaaacaactatgaggtcatcaaattg
cttctgcaacgaggtgtttccgtacctctgccacatgctgtgcgttgcaactgcatggac
tgcatgtccaacacagacgtggacagccttcgccactcacgttctcgtcttaacatctac
aaggcccttgccagtccatctctcattgccctctccagtgaagatccattcctgacagct
tttcagctcagctgggagctgaaggagctcagcacagtagagaatgagttcaagtcagag
tatgaagagttgtcccaaatgtgcaaacaatttgcaaaagaccttctggaccagactcga
agctccaaggagctggatataattctcaactaccgtgatgacatcgatcctctgctggat
gagaacaacaatgacctagcccgtttgaaactggcaatcaaatactcccagaaggagttt
gttgctcaacccaactgccagcagcttcttgcgtctcggtggtacgatgagttcccaggc
tggaggaggcgtcactgggcagtgaagctcatcacctgtgctttcattggcctcctcttt
ccattgctttctgtcttctacctgttatttccaacgactcgctatggccaattcatccgc
aaacctttcatcaagtttatctgccacacttcttcctacttgaccttcctcatcctgctc
ttcttggcctcacagcatatcgactctggtgacccagaatgccgggctgcctacttccag
ggtccagcgcccaccactgtggagtggcttatcctgccttgggtgattggtttcgtatgg
gctgagatcaaacaaatgtgggaaagtggtttaaagaactacatggatgattggtggaac
ataatggacttcataatgaactccttgtatcttgcaactatttctctaaaaattgttgca
tatacaaagtacagaggatacaaaacgagagacagctgggaaatgttgcaccccacgttg
atagcagaggccttgtttgccattgctaacatcttcagcaccttacgtctgatcagtctt
ttcactgccaactcacacttgggtcctttacagatttcacttggccgaatgcttctggac
atcctcaaatttctgtttatctactgtctcgtgcttttggcttttgcaaatggccttaac
cagctctattattactatgcaacagagggtgaaaagaactgcaccggtattcgatgtcaa
acccaaaataatgccttttcaacgttgtttgaaacactccaatcattattctggtctgtg
tttggcttgatttctctctatgtgaccaacgtaaaagcgaaccatacaattaccaaattt
gttggctctactatgttcggcacctacaatataatctccctggtggtgcttctgaacatg
ctaattgcaatgatgaacaattcctaccagcacattgcggatcatgcagacatagaatgg
aaatttgcacggacaaaattatggatgagctattttgaagagggcgggactttaccatct
ccgttcaatataatcccgagtccaaaatctgtgttttatctacttaggtggataaaaaca
aatgtgttcaagaaaccaggcaaaaaatcgatgcacacatttgagacattaggggtgcgg
gcagcagaaaatgtcagattaaaccatgaatatcaggcggtactgaagaaccttgtgaag
cgatatgttgctgcaatgatcagagatgccaaaaccgaggaagggttgacagaggaaaac
tttaaggagcttaagcaagatatctccagcttccgctatgaagttttgggaatgatgaag
agtaaacctcacagcgggggaacaagtccagttgcaagcacaacattggcttatcctgga
aattccttcaaatattgtcgtaaacctgctgccagtgagcgtaaaaaagtgtcacacatg
ttggaggcaaagtcccccactatacttcaaaataaagctgccaacacagccaactctctg
ggctcagattatcaaaataattgttctgttgttgtgtggagtgcagaaaagactgagatt
gaaatatcaaaagatcagtcaaagggtgagtgctctccgaaacaggagcaaacgtccttt
ctgaaatgtgatgaaacaaattccttgtttgtggcatctggcaggcaagacaaagctctg
agtggtaaagcagatgtggaagtctcacagaatatcaacacagaaactcaggaaataggg
ttttcttgtaccgtcctttctaaggaagtgacaaatggtccaaaaaaaaagcaaaactga
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