Xanthomonas hortorum: XJ27_04650
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Entry
XJ27_04650 CDS
T05082
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
xhr
Xanthomonas hortorum
Pathway
xhr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XJ27_04650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xhr03400
]
XJ27_04650
DNA repair and recombination proteins [BR:
xhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XJ27_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UVR
GIY-YIG
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ASW45344
LinkDB
All DBs
Position
complement(1088571..1090427)
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AA seq
618 aa
AA seq
DB search
MSARPQADFDGKAFAAQLSTAPGVYRMYAGDDTLLYVGKAGALRKRVGSYFNGTPKNARL
TSMLSQVARMDVTVTRSEAEALLLENQLIKSLSPRYNVSLRDDKSYPYVLLTREDWPRIA
LHRGPRAVQGRYFGPYTGVTGVRETLSLMHKLFKLRSCEDSVFRNRSRPCLQYQIGRCSA
PCVDLVAAPDYAESVRRATMFLEGKSDQLGEEIMQSMQQASEALEFERAARLRDLLSSLR
SMQNRQYVDGRAADLDVLACATQASQACVLLLSFRDGRNLGTRSFFPKTNGEDSADEILG
AFVSQYYAEHSPPREILLDREIPDAELIEAALSSAAEYKVTLKWNVRGERAGYLLLATRN
AQLTLVTELTSQSAQHARSEALRDMLGLAEQVKRVECFDISHTMGEATVASCVVFDASGP
VRGQYRRFNISGITPGDDYAAMRQAIERRFRRAVEENGVLPDVLLIDGGAGQLAQAKGAL
ADLGIENVLLVGVAKGEERRAGHEALVMADGRELRPGAASPALQFIQQVRDEAHRFAITG
HRGRRQKARMTSKLEDIPGIGPRRRASLLKHFGGLVGLKAAGEAEIARVDGVNAALAARI
YANLHGLALPDAAGESSP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaggccccaagctgatttcgatggaaaggcgtttgctgcccaactgagcact
gcgcctggcgtctaccgcatgtatgcgggcgacgacacgctgctgtacgtgggcaaggcc
ggcgcgctgcgcaagcgtgtgggcagctatttcaacggcacgccgaagaacgcgcggctg
acctcgatgctgtcgcaggtggcgcgcatggacgtcaccgtgacccgcagcgaggccgaa
gcgctgctgctggaaaaccagctgatcaagtcgctgtcgccgcgctacaacgtctcgctg
cgcgacgacaagagttacccgtatgtgttgctgacgcgcgaagactggccgcgcatcgcg
ctgcaccgcggcccgcgtgcggtgcaggggcgctatttcggcccgtacaccggcgtgacc
ggcgtgcgcgaaaccttgagcctgatgcacaagctgttcaagctgcgcagctgcgaagac
agcgtgttccgcaatcgctcgcggccgtgtctgcaatatcagatcggccgctgcagcgcg
ccgtgcgtggacctggtcgccgcgcccgactacgcagaatcggtacgccgcgccacgatg
ttcctggaaggcaagagcgaccagcttggcgaagagatcatgcagtcgatgcagcaggcc
agcgaagcgttggagttcgagcgcgccgcgcgtctgcgcgatctgctgtcctcgctgcgc
agcatgcagaaccgccagtacgtcgacggccgcgcggccgacctggatgtgctggcctgc
gccacgcaagccagccaggcgtgtgtgctgctgttgagttttcgcgacggccgtaacctg
ggcacgcgttcgttcttccccaagaccaatggcgaagacagcgccgacgaaatcctgggt
gcgttcgtgtcgcagtactacgccgaacattcgccgccgcgcgagatcctgctcgatcgc
gaaatccccgatgccgagttgatcgaagccgcgcttagtagcgccgccgagtacaaggtg
acgttgaagtggaacgtgcgcggcgagcgtgccggctatctgctgctggccacgcgcaac
gcacagctgaccctggtcaccgaactcaccagccagagcgcgcagcacgcacgcagcgaa
gcactgcgcgacatgctggggcttgccgagcaggtcaagcgggtggagtgtttcgatatc
agtcacaccatgggcgaggcgacggtggcctcgtgcgtggtgttcgatgccagcggcccg
gtgcgcggtcaataccggcgcttcaatatttccgggatcacgccgggcgacgactacgcc
gcgatgcgccaggccatcgagcggcgctttcggcgcgcggtggaagagaacggtgtactg
ccggatgtgttgctgatcgacggcggcgcaggtcagctggcgcaggcaaagggcgcgctg
gccgatctgggcatcgagaacgtgctgctggtcggcgtggccaagggcgaggagcgcagg
gcggggcacgaggcactggtcatggccgacggccgcgagctgcgccccggtgcggcatcg
ccggcgctgcagttcatccagcaggtgcgcgacgaagcgcatcgctttgcgatcaccggt
caccgcggccgccgccagaaggcgcgcatgaccagcaagctcgaggatatccccggcatc
ggcccgcgccgtcgcgcgagcctgctcaagcatttcggcggtctggtcgggctcaaagcc
gccggcgaggccgagattgcgcgcgtggatggggtcaatgccgcactcgccgcgcgaatc
tacgctaacctgcacgggctggcgctccccgatgcggcaggcgagtcgagtccgtaa
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