Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00360
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Entry
AMD24_00360 CDS
T04108
Symbol
clpB1
Name
(GenBank) Chaperone protein ClpB 1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
xii03110
]
AMD24_00360 (clpB1)
Chaperones and folding catalysts [BR:
xii03110
]
Heat shock proteins
HSP100
AMD24_00360 (clpB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
ATPase_2
Mg_chelatase
NBD_SMAX1
AAA_14
AAA_28
AAA_7
AAA_3
IstB_IS21
AAA_18
TniB
RuvB_N
NACHT
Zeta_toxin
bpMoxR
AAA_24
T2SSE
PV-1
AAA_19
AAA_25
DUF815
ResIII
Torsin
YlqD
Motif
Other DBs
NCBI-ProteinID:
ALJ56541
LinkDB
All DBs
Position
384735..387302
Genome browser
AA seq
855 aa
AA seq
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MHPDKYTIKMQEAFNSALSIASTFDHQQLTPEHLLLSLLRQKNGVATLLLEKLGVYPGNL
EQQLERKLKTLPSVYGGVGPHIGDQLRKTMQVAEEEMEKLQDAFLSAEHFILALINGESQ
SGHLLRAEGVDRQKIMGVLASTRGSQRVIDQSPEDKYQILEKYGRDLTALASRGRIDPVI
GRDEEIRRTMQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIASGDVPEALKNKKIIALD
LGSMIAGAKFRGEFEDRLKAFLKEVTTREGGMILFIDELHTIVGAGATEGAVDASNLLKP
QLARGELHTIGATTLNEYRKYIEKDAALERRFQPVIVDEPSVEDTVAILRGLKEKYEVHH
GVRIQDAALIAAAVLAHRYISDRFLPDKAVDLVDEAASRLKIELDSMPTEIDQVEREIMQ
MEMEQQALKKETDIVSQERLTKLEKELSRKKDIAFQLKSRWKKEREEIRKTQGLAEEIDK
LRGELEVRQRQNNLERASEIQYGLLPKLQRQLGELTEKQGSSPTLLKEEVTEDDIAEIVA
AWTGIPVSRLQETEKQKLLKIEERLTQRIVGQKTAIVAVSNAIRRARAGLQDEKRPVGSL
LFLGPTGVGKTELSKALAELLFDDENTMVRLDMTEYIEKHSVSRLIGAPPGYVGYEEGGQ
LSEAVRRRPYSVVLFDEIEKAHRDVFSILLQVLDDGRITDGQGHTVDFKNAVIIMTSNIG
SQFVMDDLPEEERNRCIMEALFKYFRPEFLNRVDEIIIFNRLSNADIERIVDIQIACLSR
RMEQQKISLDLTLAGRAFLAHEGYSPLYGARPLKRVIQHKLLDPLSLEILDGKIREGDRL
VADVRGGYFFFLKKK
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgcacccagacaaatacaccattaaaatgcaagaagcctttaacagcgctcttagtatt
gcttctacgtttgaccaccagcagcttactccggaacacctccttcttagtcttctaaga
caaaaaaatggggttgctactctactcctagaaaaattgggtgtttatcccggtaacctt
gagcaacaactggagaggaagcttaaaaccctgccaagtgtttacggtggagttggccca
cacataggtgatcagctgcgcaagaccatgcaagttgctgaggaggaaatggaaaaactt
caggacgcgttcctaagcgctgagcacttcattctcgcgctgattaatggtgaatcacaa
agcgggcacttgctgagagcagaaggtgtagaccgccaaaagataatgggagtgttggca
agtacgcgtggttcccagagagttatagatcaaagcccagaggataaatatcagatccta
gaaaagtatgggcgtgatcttactgcgctcgccagtcgtggtagaatcgatcccgtcatt
ggacgagacgaggaaattcgccgtaccatgcaggttctttctcgccgtacgaagaacaac
ccagttctcattggagagcccggtgtggggaaaaccgccatcgtggaaggtttggcacgg
cgtatcgccagtggagatgtaccagaagcacttaagaacaaaaaaatcattgcattggac
ttgggatctatgatcgctggtgccaagtttcgtggagaatttgaggatcgtctaaaagct
tttctaaaagaagtgaccactagagaagggggaatgattctctttattgatgaactccac
actattgtcggggctggagctacagaaggtgctgtggatgcttctaatctccttaagcct
caactagctaggggggaactccatactattggcgccacgacgctaaacgaatatcgaaaa
tacattgaaaaggacgctgctctggagaggagattccagccagttatagtcgatgagcct
agtgttgaggataccgtagctattctccggggattaaaagagaagtatgaggtccaccac
ggggtacgcatccaggatgcagctttaattgcagcagctgttcttgctcaccgttacatt
tcagaccgtttcctccctgataaagcggtcgatcttgttgatgaagcagcctctcgcctc
aaaatcgagctggattccatgcctaccgaaattgatcaagttgagcgggagattatgcag
atggagatggaacagcaagctttgaagaaagaaacagacattgttagccaggaacgcctc
acaaagctggaaaaggagctttctagaaagaaagatatagcatttcagcttaaatcccgc
tggaaaaaggagagagaagagattaggaagactcagggattggctgaagagatcgacaag
ctacgtggggagcttgaagttagacaacgtcagaataacctcgagcgtgccagtgaaatt
cagtatggtctcctcccgaaactacaacgtcaacttggggagctgaccgagaaacaaggt
tcctcccccactcttcttaaggaggaagttactgaagatgatatagcggaaattgttgct
gcgtggacaggtattccggtctccagattgcaggaaactgaaaagcaaaaactccttaaa
atagaagaacgtcttacacagcgaattgttgggcaaaagacggccattgttgcagtttcc
aatgccatccggcgtgcgcgggcaggcttacaagatgaaaagcgacctgttggctctcta
cttttccttggaccaaccggagttgggaagaccgaacttagcaaagctcttgctgaactt
ttatttgacgatgagaatacaatggtgcgtctagacatgactgagtacatagaaaagcat
agtgtttcccgtcttattggtgccccaccaggatacgtaggatacgaagaaggcggacag
cttagtgaagctgtacgtcgaagaccgtactccgtcgttctctttgatgaaatcgagaag
gctcatcgtgacgtattcagcattcttcttcaagtattggatgatggtcgcatcacggat
gggcagggccatactgtggatttcaaaaatgccgtcattattatgacaagcaacatcggc
agccagtttgtcatggacgacctaccagaagaagaacgcaatcgctgcatcatggaagct
ttattcaaatatttccgtccggaattccttaatcgagtggatgaaatcattatctttaat
cgactttccaacgctgacatcgagagaattgtagacattcaaatcgcttgcctctctagg
agaatggagcaacagaaaatttctttagatttaacccttgctgggcgtgcttttctcgct
catgaaggctacagcccgctctacggagcaaggcctctcaagcgtgtcatccagcataag
ttgcttgatccgttgagcctcgagattttggatgggaaaattcgtgagggtgataggctg
gttgcagatgtccgaggcggctacttcttttttttaaagaaaaagtaa
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