Candidatus Xiphinematobacter sp. Idaho Grape: AMD24_00588
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Entry
AMD24_00588 CDS
T04108
Symbol
ycfH
Name
(GenBank) putative deoxyribonuclease YcfH
KO
K03424
TatD DNase family protein [EC:3.1.21.-]
Organism
xii
Candidatus Xiphinematobacter sp. Idaho Grape
Brite
KEGG Orthology (KO) [BR:
xii00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AMD24_00588 (ycfH)
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Motif
Pfam:
TatD_DNase
Esterase_PHB
Motif
Other DBs
NCBI-ProteinID:
ALJ56756
UniProt:
A0A0P0GAJ2
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Position
complement(623269..624129)
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AA seq
286 aa
AA seq
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MEKWVCIPCSMLIDTHAHLNELEYTSDLEEVIARATDAGVQRILSIGTGLQSSLRAVSLA
ERFPSLYAVVGIHPTSVEEEEQDFLKPLQEIASHPKVVAIGETGLDFHCLPSKTTTPCRG
QSSKEVDGTAADEAYKSLQAKVFLQHLDLATQLGLNVVIHQRDAWEDTWRLLTPYSGRLR
GVFHCFGGTIEQASEIIAGGHLISFTGIVTFNNAETVRNTVAQVPHNAYMVETDCPFLAP
VPFRGKRCEPAHVRTVAEAISRVRGESLSTIAQQTTATARTFFQLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatgggtatgtattccgtgctctatgttgattgacacacatgcccacctaaat
gagttagagtatacttcagatttagaagaagtaatcgctcgtgcgactgacgcaggtgtt
cagcgcatactgagtattggaactgggcttcaaagtagcctgcgagcagtgtctctcgca
gaaagatttccttccctttatgcggttgttgggattcacccgaccagtgttgaggaagag
gagcaagacttcctcaaaccacttcaagaaattgcttcacatcctaaagttgttgctatc
ggcgaaactggactagattttcattgtcttcccagtaagactacaacaccctgtcgtggt
cagtcttcaaaagaagtagatggcactgccgcagacgaggcatataaatccctccaagcc
aaggtatttttacagcatttagatctggctactcaacttggtctcaacgtagttatccat
caaagggacgcatgggaagacacatggcgtctccttactccttattctggacgcctgcgg
ggggtttttcattgctttggaggaacaatcgagcaagccagtgagattattgcaggaggc
catcttatctcttttacggggatagtgacttttaataatgctgaaactgtacgaaatacg
gttgctcaagtaccccataacgcttatatggtggagacggattgccctttccttgcgccc
gtaccgttcagaggtaagcggtgcgaacctgcccacgtccggacagtagcggaagctatt
tcacgggtgcgtggggaaagccttagcaccattgctcaacagactaccgccacggctagg
acattctttcagttgaagtga
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