Xenopus laevis (African clawed frog): 100037138
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Entry
100037138 CDS
T01010
Symbol
nup107.S, nup107
Name
(RefSeq) nucleoporin 107kDa S homeolog
KO
K14301
nuclear pore complex protein Nup107
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100037138 (nup107.S)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xla03019
]
100037138 (nup107.S)
03036 Chromosome and associated proteins [BR:
xla03036
]
100037138 (nup107.S)
Messenger RNA biogenesis [BR:
xla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100037138 (nup107.S)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100037138 (nup107.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
Motif
Other DBs
NCBI-GeneID:
100037138
NCBI-ProteinID:
NP_001091312
Xenbase:
XB-GENE-1006600
UniProt:
A2RV69
A0A974D924
Structure
PDB
PDBj
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All DBs
Position
3S:complement(89062913..89088377)
Genome browser
AA seq
916 aa
AA seq
DB search
MDMLSPVVREAEVSRAARRQSSNRKNPADESWSNATPTRGPSSRTTGQTLFRQHMTPQTW
NSSRPPDVSAILGTVGRSPRLLQTPGRLANLSMMSNPDDSVWTTTFSPGRTGMYTTLDSP
SFTEDITLSAVMLQEEDPGEAATMSMYPDFLKSFLEHPSSAVFELIEQYEATCNTQITLL
KKIVKRVTPGQQKFSKTASILWLLQQEMVTWRLIAALYRDRIQSALEEENMFEIAAPNAS
EKTIVDKLFQRDTLVRQSQLVVDWLESIAKDEVGDFSDNIEYYAKSVYWENTLHTLKQRS
MLSLGSSRPLVSELDPDAPIRQKLPLDDLDREDDIRLLKYLFTLIRAGMTDEAQRLCKRC
GQAWRAATLEGWKLYHDANINGGTELQAVEGNPYRCVWKTCCWRMAEDEQFNKYERAIYA
TLSGNLKQLLPVCESWEDTVWAHFKVMVDSLVEQEIRASIISFNEANELPREYLEANWTL
DSVFEELQATDKKRVLEENREHYHIIQKFVILADVDGLMDEFSEWLSNGKNLLLGHLLRF
MTHLLLFFRTLGLQAKEEVSVEVLKTYIQRLINEKQIELIAFYVSHLPQELAISQYAVFL
ENITDPDQRQRCLELAKEAGLDVASITKTVVENTRKKDAGEFAHHDFAPALDSGTSEEDR
AKIDVIDWLVFDPAQRAEALKQSNAIMRKFLASKKHEAAKEVFAKIPQDSIAEIYSQWEE
QAMDSALPAEDDNAIREHLCIRAYLESHEAFNEWFKHINSPPQKPTLVGQASFTEKVAHE
HKEKKYEMDFGIWKGHLDALTSDVKEKIYNVLLFVDGGWMVDVREDTEEDPERSHQMVLL
RRLCLPMMCFLLHTVLHNTKQYKDCLRLADIVSSENQKLYTVFSKTEMRNLLQKLRESSL
MLLDLQLDPLGYEIQS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggatatgctttcaccagtagtgcgggaggcagaagtttctagagcagctcgacgccaa
agctctaacaggaagaatcctgctgatgagagctggagcaatgcaacgccaacaagaggc
ccatcatctcggacaacaggacaaacgctatttcgacagcacatgacaccacaaacctgg
aattcttcaaggccaccagatgtgtctgcaatactgggcactgttggccgatcacctcgc
ttgctacagacacctgggcgtttggcaaacctgtctatgatgtccaatccagatgacagt
gtttggacaacaacgttttcccctgggcgaactggcatgtatactacactggattctcct
agttttactgaagatatcactctaagtgcagtaatgcttcaggaggaggatcccggggaa
gcagcaacaatgagtatgtatccagattttctcaaatccttcttggaacacccttccagt
gctgtatttgagcttattgaacagtatgaagctacttgcaatacccagattactttactt
aaaaaaattgttaaaagagtaactccagggcaacagaagttttcgaaaactgccagcatc
ttatggctactccagcaagagatggtaacatggaggcttattgctgcactctacagagat
cgtatacagtctgcattagaagaggaaaacatgtttgaaattgctgcacccaatgccagt
gaaaagacaatagtagataaactcttccaacgagacacacttgttcgtcagagtcagctg
gtggtggactggttagaaagtatagccaaggatgaagttggggacttctcggataacatt
gagtattatgccaaatctgtatattgggaaaatacattgcacacattgaagcagagaagc
atgttatctttagggagcagtcgtccactggtgtctgaactggaccctgatgcacctatc
cgacagaagctgcctctagatgatcttgatcgtgaggatgacataagactgctgaagtat
ctcttcacacttatcagagctggcatgacagatgaggctcagcgtttgtgtaaacgatgt
gggcaggcctggagagcagctacattggaaggatggaaattgtaccatgatgctaatatt
aatggaggtacagaactgcaggctgtggagggaaatccttatagatgtgtgtggaaaacc
tgctgttggcgcatggcagaagatgagcagttcaataaatatgaacgagccatttatgca
acactgagtggaaatttaaaacagcttcttcctgtgtgtgagtcgtgggaagacactgtt
tgggcacattttaaggttatggtggacagtctggtagagcaagagatcagagcatcaatc
atctcatttaatgaggcaaatgagcttcctagagagtatttggaggcaaactggacctta
gacagcgttttcgaggagcttcaagccacagacaaaaagagggttttggaagaaaaccgt
gaacactaccatataattcagaagtttgttatccttgcagatgtagatggtctcatggat
gaattcagtgagtggttgtcaaatggaaaaaacctgctgctaggacatcttctgagattc
atgacacatcttcttttattcttccgaactctgggactacaggctaaggaggaggtctct
gtggaagtgttgaaaacttacatacagaggctcattaatgagaagcaaattgagctgatt
gctttttatgttagtcacctacctcaagagcttgcaatttctcaatatgctgtgttcctg
gagaacattaccgatcctgaccagcgtcagaggtgtctagagcttgccaaggaagcaggt
cttgatgttgcatctataacaaagacagttgttgaaaacacgcgtaaaaaagatgctggg
gaatttgcacaccacgattttgcaccagctttagattcggggaccagtgaggaggaccga
gcaaagattgatgtgattgattggctggtttttgatcctgctcagagggcagaagctttg
aaacagagtaatgccatcatgaggaaatttttagcttccaaaaagcatgaagctgctaaa
gaagtatttgccaagattccccaggattccatagcagagatctacagtcagtgggaggag
caagcaatggacagtgctctgccagctgaggatgataatgctatccgggaacatctgtgc
ataagagcctatttggaatcccatgaagcattcaatgagtggtttaagcacattaattct
ccccctcaaaaaccaactttggttggacaagcatcattcaccgagaaagtggcccatgag
cataaagagaaaaagtatgagatggattttggtatctggaaaggtcacttagatgctctg
acatcagatgtaaaagagaagatctacaatgttctgcttttcgttgatggaggctggatg
gttgacgtcagagaggatacagaagaggaccctgagcgtagccatcagatggtcttgtta
aggaggctgtgtttgccaatgatgtgctttctcttacacactgtgctacacaatacaaag
cagtacaaagactgccttagactggcagatattgtttcatctgaaaatcagaagctgtac
acggtattttcaaagaccgaaatgagaaatctactgcaaaaattaagagagtcttctcta
atgctgttagatttacagctcgatcctttgggatatgaaatccagtcctga
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