Xenopus laevis (African clawed frog): 100037172
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Entry
100037172 CDS
T01010
Symbol
trip13.L
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100037172 (trip13.L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xla03036
]
100037172 (trip13.L)
Chromosome and associated proteins [BR:
xla03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
100037172 (trip13.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_16
nSTAND3
AAA_18
Viral_helicase1
IstB_IS21
AAA_14
ATPase_2
AAA_5
NPHP3_N
RuvB_N
AAA_28
TsaE
AAA_33
TIP49
RNA_helicase
ABC_tran
bpMoxR
AAA_25
AAA_30
AAA_11
DUF815
NACHT
Cytidylate_kin
ATPase
AAA_24
AAA_7
AAA_17
KAP_NTPase
Mg_chelatase
PduV-EutP
SLFN-g3_helicase
AAA_19
Rad17
PhoH
NB-ARC
SPC25
SRPRB
nSTAND6
AAA_3
Parvo_NS1
NTPase_1
Motif
Other DBs
NCBI-GeneID:
100037172
NCBI-ProteinID:
XP_018121621
Xenbase:
XB-GENE-974903
UniProt:
A0A1L8FWZ2
A0A974CP03
LinkDB
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Position
6L:68643265..68675707
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AA seq
432 aa
AA seq
DB search
MDEVAGDLKQALPNVHDTFQVHVEVHQKSNSPAASQDIRSHVMQLLNRHCVVFGDYSWTE
FDDSFLIKNIHSVSIVDTELKLKDRQPIDLSKCTVLVHIFQLNEDGPCTENLEEENEDLV
AANHWLLPAADFHGLWDSLIYDSQIKSKLLDYIETAMLFSDKNVDSNLISWNRVVLLHGP
PGTGKTSLCKALAQKLTVRLSYRYRYGQLVEINSHSLFSKWFSESGKLVTKMFQKIHDLI
NDKEALVFVLIDEVESLTAARKASRAGTEPSDAIRVVNAVLTQIDHIKRYPNVVILSTSN
LTEKIDVAFTDRADIKQYIGPPSPAAIFKIYLSCIEELMKRQIIYPKQQLLTLRDLEMIG
YLENNVSKLSLQLNEISRKSEGLSGRVLRKIPFLAHALYLQSPTVTIERFLWALSLAVDE
QFQERKDFSDNI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtagctggagatctgaagcaagcccttccaaatgtacacgacacttttcaa
gtacatgtggaagtccaccagaaatcaaacagcccagcagcgagtcaagatataagatct
catgtcatgcaactattgaatagacattgtgtagtgtttggagattattcatggacagag
tttgatgacagttttttaattaaaaatatacattccgtctccattgttgatactgaatta
aaactgaaagaccgacagcccatcgatctcagcaagtgcacggtgttggtacatattttt
cagctaaatgaagatggtccttgtacagaaaatcttgaagaggaaaatgaggatcttgtg
gctgctaatcattggctgctacctgctgctgattttcatggtctatgggacagtttaata
tacgacagccaaattaagtccaaacttttagattatattgaaactgcaatgttattttct
gacaagaatgttgacagcaatttgatatcctggaacagagtggtgctcttgcatggacca
cctggaacaggaaaaacttcattatgcaaggctctggcacagaaactcaccgttcgacta
tcatataggtacagatatgggcagcttgttgagatcaatagccacagtcttttttcaaag
tggttttctgagagtggcaaattggtgactaaaatgtttcagaagattcatgatctaata
aatgataaagaagcactagtatttgttttgattgatgaggtggaaagtcttactgcagct
cgtaaagcttccagagctggtactgagccttcagatgccattcgtgtagttaatgctgtg
ctgacacaaattgatcatatcaaaaggtatcccaatgtagtcatcttaagcacctcaaac
ctcacagaaaaaattgatgttgcttttactgatagagcagatataaagcagtacattgga
cctccatctcctgctgctatatttaaaatttatctgtcttgcatagaagaacttatgaag
cgtcagatcatttacccaaagcagcaactgttaacgttacgtgaccttgaaatgattggc
tacctggaaaataatgtatccaaacttagcttgcagttaaatgaaatttcaaggaaaagt
gagggcctcagtggaagagtgcttcggaaaataccttttctggcacatgcactttattta
caatctccaacagttaccatcgaaaggttcctttgggctctttcactggcagtggatgaa
cagtttcaagaaagaaaggatttttcagataatatataa
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