Xenopus laevis (African clawed frog): 108697616
Help
Entry
108697616 CDS
T01010
Symbol
zbtb16.S
Name
(RefSeq) zinc finger and BTB domain-containing protein 16 isoform X1
KO
K10055
zinc finger and BTB domain-containing protein 16
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xla03000
]
108697616 (zbtb16.S)
04121 Ubiquitin system [BR:
xla04121
]
108697616 (zbtb16.S)
Transcription factors [BR:
xla03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108697616 (zbtb16.S)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108697616 (zbtb16.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf_UBZ
zf-C2H2_15
Endonuclease_7
zf-C2H2_16
zf-C2H2_REST
zf-MYST
MIX
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
108697616
NCBI-ProteinID:
XP_018083302
Xenbase:
XB-GENE-6489332
UniProt:
A0A8J0TFD8
LinkDB
All DBs
Position
7S:74206978..74301662
Genome browser
AA seq
667 aa
AA seq
DB search
MDFTNMGMIQLQNPNHPTGLLLKANQMRLAGTLCDVVIMVDTQEFHAHRTVLACTSKMFE
ILFHRSSQQYTLDFLSPKTFQQILEYAYTATMQAKVEDLDDLLYAAEILEIEYLEEQCLK
ILETIQASEENDGELCTGDRAVEEEDERKARFIKNMLNTKHSSDESGYTSTSNQNLVDQS
PSVSTSYGLSGMSPTKTAVDSLMTIGQSLLQGALQQNALDLHSTNRLQSLSEIKTEVMQV
DEPSNQESPTAESSASSGDKSDSKSSPGTPTRSSVITSARDLSFSRDETTPDQSVELGQG
LHVTQEHAVSQAEKHLSVYSVLPNHKGESMISMPTSMATALHMQPSLAVSMDFSAYGGLL
PQGFLQRELFNKLGELAAGMKNEGNSLNEHCSVCGANLPDNDSVEHHRKLHSGMKTYGCE
LCGKRFLDSLRLRMHLLAHSGITGMSLSAAGAKAFVCEQCGTQFSKEDAYDAHRRTHSGS
DMAVFCLLCGKRFQTQTALQQHMEVHAGVRSYICSECNRTFPSHTALKRHLRSHTGDHPY
ECEFCGSCFRDESTLKGHKRIHTGEKPYECNGCGKKFSLKHQLETHYRVHTGEKPFECKL
CHQRSRDYSAMIKHLRTHNGASPYQCTICLEYCPSLSAMQKHIKSHKPEDIPADWRIEKT
YLYLCYV
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggattttactaatatgggtatgatacagttgcagaaccccaaccaccctacgggtctt
ctgctgaaagccaaccaaatgaggctggcagggaccctgtgcgatgtagtgataatggtg
gacactcaagaatttcatgcccataggacagtattggcttgtacaagcaagatgttcgag
atcctcttccaccgaagcagtcaacagtacacattagactttttgtcaccaaagactttt
cagcaaattttagaatatgcttacactgctacaatgcaggctaaagtagaagatttggat
gacctcctgtatgctgcagaaatcttagaaatagagtatctggaggagcagtgcttaaag
atcttggaaaccattcaagcttcagaagagaatgatggcgaactctgcacaggagacagg
gctgtggaagaagaagatgaaagaaaagcaaggtttatcaaaaacatgttaaacacaaag
cattccagtgatgaaagtggttacactagcacgagcaaccagaacctagtggatcagagt
ccatcagtgtcaacatcttatggactttcaggcatgagcccaaccaagactgctgtagat
agtttaatgactattggccagtctttacttcaaggagcactgcaacaaaatgcgctagat
ttgcactccacaaataggcttcagagcctctccgagataaaaacagaagtcatgcaagtt
gatgagccctccaaccaagaaagcccaacagcagagtccagtgcttctagtggggataaa
tctgatagcaaaagcagtccaggaacgccaactcgcagtagtgtaatcacaagtgcgcga
gacctgagttttagtcgtgatgagactacacccgatcagtctgtggagttgggtcaaggt
cttcatgttactcaagagcatgcagtatcccaagcagagaaacatctcagtgtctattct
gtactccctaaccacaaaggtgaatcaatgatcagcatgccaacctctatggcaactgct
cttcatatgcagccatctctggctgtatctatggactttagtgcatatggaggactactc
ccacaaggttttctccagagagagttgttcaacaagcttggagaacttgcagctggtatg
aagaatgaaggcaacagccttaatgagcattgtagtgtatgtggagcaaatcttcctgat
aatgactcagtggaacatcacaggaaactgcacagtggtatgaagacctatgggtgtgag
ctctgcggaaaaagattcctggatagtctgaggctgcgaatgcacttgttggctcattca
ggaataactggtatgtctctgtcagcagctggggcgaaggcatttgtgtgtgagcagtgt
ggaactcagttttctaaggaagatgcatatgatgcgcaccggaggacacactcaggctcg
gacatggctgtgttctgtctactttgtggaaagcgctttcagacacagactgccctgcag
cagcacatggaggtccatgcaggagtgagaagctacatctgcagtgagtgcaaccggact
ttccccagccacacagcactcaaacgccacctacgctcacacacaggtgaccatccttac
gagtgtgagttctgtggcagctgctttcgggatgagagcacattaaagggacacaagcgc
atccatacaggggagaagccttatgagtgcaatggctgcgggaagaaattcagcctcaaa
catcaattagaaacgcactacagggttcacacaggtgagaagccctttgaatgcaaactg
tgccaccagcgttccagagactactctgccatgatcaaacatctccgaacccacaatgga
gcatctccttaccagtgtaccatctgcctggagtactgcccaagcttgtctgccatgcag
aaacacataaaaagccacaagcctgaagacatacctgctgactggagaattgagaaaacc
tacctatacttatgttatgtgtaa
DBGET
integrated database retrieval system
