Xenopus laevis (African clawed frog): 108699182
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Entry
108699182 CDS
T01010
Symbol
ubr1.L
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xla04121
]
108699182 (ubr1.L)
Enzymes [BR:
xla01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108699182 (ubr1.L)
Ubiquitin system [BR:
xla04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
108699182 (ubr1.L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
zf-UBR
ClpS
Motif
Other DBs
NCBI-GeneID:
108699182
NCBI-ProteinID:
XP_018086543
Xenbase:
XB-GENE-6489184
UniProt:
A0A8J0TKT2
LinkDB
All DBs
Position
8L:97561500..97643290
Genome browser
AA seq
1761 aa
AA seq
DB search
MEAGGGRVEHGREPGEREMHAMCLVNALDFASAFHQHVAKHVPQIYRDELQPQVEKQEEL
VQERILTPLEWCLFRDDPNVFMEKLRHSAAPPLCGRVFRGGETTYSCRDCAIDPTCVLCM
DCFQNSIHKSHRYKMHSSMGGGFCDCGDTEAWKTGPYCNIHEPGASDQNSDFRLTDELLA
QTKKVFPVIIQYIVDMLIWEEQKSLPAYLDKCTEEWNQYYCVLYNDEHHTYDHFIYSLQR
SLGCDQKEAQTLTTAAEREGRRAVKKGTSQQCQEVAESLKTNSENVSLKPFRVEVLHGHV
MAHQSFALSLANWLNKLLAYSSDFRQIFCQVCLEREPKPSSFTHTCYVSLLILKDSKLHK
GVRKVLHDLIFSSFFMEMEYKKQFAIEFVKHYKQIQKEYMSDDQDRNISVTAISVQVFTV
PTLARLLIEEQNVIKVITETLLEIITEYLDSDNKFNFQGYSQERFFMVYAIILDLKYILI
SKPTSWSKKLKAKFLEGFKSFLYVLSCMQGMEGISRMVGQHVEMDSDWEAAIAMQMQLKN
VLTLIQEWCATDDDILLKSYKECHQSLLQCRTPAPSQEKKLIRMCGHSYQSYPYQVSKDP
ISIHLPLSRMLAGLHAQMCRSGVITRLCEIFSPENLQVELMIEHPLRCLVLVGQVAAEMW
RRNGLTIVSQVFYYHDVKCREEMYDKDIVMLQIGASYLDPNSFLLLLLQRYELEEAFSNV
AVPTKDMDLARQHNILIEEMLHVLICIIGERYVPGISNVTKEECTMREIIHLLCMEPMAH
SAIAKALPETDNTDICLDKLITKVATFKKPGVSGHGVYELKAEYLDQFNVFFYHYTKTQR
SKAEHTQKKRRKQENSSEALVPPAPPDFSSAFRNVINLLSCDVMMHILQTVLQRATEEDP
IMWTEGIIQMALHIIALGLLEEKQQLQRAAENEVTFHFYHKATRVGTADLNAESLVTLLE
KLKSITQLEAQKDMIIWVRQLFETVKGLREASSHTVPTGAPSDVVKAEEASMTSMVLTFQ
GQSPLEKEKRKRKAEAARLHRQKIMAQMSALQKNFIETNKLLYDTTVEVHDSTSPVEESP
LLAEEGSKVVLGPKRGPTVPSKDVLTCILCQEEQEVRLDKPTMVLTACVQKSTALSQTRG
KVVAHTGETFDPLFTNPEMLYGTHTGSCGHVMHVVCWQKFFEAMQKNTQQRLHVELIFDL
GNGEYLCPLCKCHCNTVIPIIPHVAQQIKSVDAEAINCVFSLPHWLDIVAARISGYNFNT
IKGTKPITPEFCQIHQDQNYEFRSILSFGVQAPPRYPTSTEGMLVHFATTVYRVGLNVPP
NESDLRMPVMAWNTCAFTIQCIESWLRDEEKPLFGSLQNRQHAGLQALVKFTEAQRVTCP
QPLIQRHLIQLLAVFLPNINIEDTPSFLSVDVFHLLVGSVLAFPALYCEDNVDLHPSTLV
STYNNLYLFHLLTMTHILQIIISLATDNVPSTEPDDCEEARTAATLCQDIAQLTNNCVTV
DLPGWYVWKCVREGIMPYLRCAALFFHYLLGVMPPEELQSSGTTDNQLPALCSFLCLPTN
ILLLFQENKDTVKLLIQSRMSSDQFLQSVLAGKTTALRYPRKRNTLIELPEDYSSLLNQA
SQFKCPKSQDAERKHPVMCLLCGAILCSQNTCCQEVVNGEELGACTVHAMHCGAGVCIFL
RIRECKVVLMEGKTRGCIYPAPYLDEYGETDPGLKRGNPLHLCHERYRKLHQLWQQHCII
EEIGHNLEINQMFFGFNWSLL
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggaggctggaggtggaagagtggaacatggcagggagccaggggaaagagaaatgcat
gccatgtgcttagtcaatgctttggattttgcctctgcctttcatcaacacgtggcaaag
catgtcccccagatttatagagatgagctgcaaccacaagtggagaagcaggaggagctg
gtacaggaacgtatcttaaccccattggagtggtgcctgttcagagatgacccaaatgta
ttcatggagaagctacggcacagtgcagctcctccattgtgtggaagagtctttagagga
ggggagacaacctattcctgcagggattgtgcaattgatccaacctgtgtcctatgtatg
gattgtttccagaacagcattcacaaaagtcacagatacaagatgcactcttccatggga
gggggattttgtgactgtggagatactgaagcctggaaaactggcccatattgtaacatc
catgagccaggggcatccgatcagaattcagactttcgattgacagatgaactcctggcc
caaaccaaaaaagtgtttcctgtgattatccagtatatagttgacatgttaatctgggag
gaacaaaagagtttgccagcatacctggataaatgcacagaagagtggaaccagtactac
tgtgtgctttacaacgatgaacaccatacctatgatcacttcatctacagtttgcagaga
tcccttggctgtgatcagaaagaagcacagacattaactactgcagccgagagagagggc
cgcagagctgttaaaaaaggtacatcacagcaatgccaggaggtggcagaaagccttaag
actaattcagagaacgtgtcactgaaacctttccgtgtggaagtgctgcatggtcatgta
atggctcatcaaagctttgcactgagtttagcaaactggctaaacaaactcctggcctac
tcgagtgacttccgacagatcttctgccaagtgtgtttagagcgagagccaaagcctagc
agttttactcacacttgctatgtcagtttgttaattctaaaggactccaagcttcacaaa
ggagttcggaaagttctgcatgatctgatcttcagcagctttttcatggaaatggagtat
aagaaacaatttgcaatagagtttgtaaagcattacaagcagatacagaaagaatacatg
agtgatgatcaggacaggaacatttcagtgactgcaatatctgttcaggttttcactgtt
cctaccctggcacgtctgctgattgaagaacaaaatgttataaaagtgattacagagact
ttgctcgagataataacagaatatctagactcggacaataagttcaacttccagggctac
agccaggagcgcttcttcatggtatacgccattatccttgacctcaagtatatccttatc
tctaagcctacatcctggtccaagaagttgaaagccaagtttttggagggatttaaatct
ttcctctatgtattatcctgtatgcagggcatggaagggataagcaggatggtgggacag
catgttgagatggattccgactgggaagctgcaatagcaatgcagatgcaactgaaaaat
gtattgacactgatacaggagtggtgtgcgacagatgatgatatattgctgaagtcatac
aaggagtgccatcagagtcttctgcagtgtcgcaccccggccccttcccaagaaaagaag
ctgataagaatgtgtggccattcataccaaagctatccataccaggtgtccaaagatcca
atcagcatacacctacctctctctcggatgcttgctggtttacatgcacagatgtgtagg
tccggtgttatcacaagactgtgtgagattttttccccggaaaacttacaggtggaacta
atgattgaacatcccttgagatgcctggtgttggtgggacaggtagcagctgagatgtgg
cggaggaatggccttactattgttagtcaggttttttactatcacgatgtcaagtgcagg
gaggagatgtacgacaaagacattgtgatgctacagattggtgcatcctacctggatccc
aacagcttcctactgcttctgcttcagaggtacgaactggaggaggcattctctaatgta
gctgtgcccaccaaagacatggatctagcaaggcaacacaacatcttaatcgaggaaatg
ttgcatgtccttatttgcattattggtgagcgctatgtgccaggcattagcaatgttact
aaagaagagtgcactatgagagagatcatccatctgctttgtatggaacccatggctcac
agtgcaattgccaaggctttaccagagactgacaacactgacatatgcctggacaaactc
atcactaaagttgccacttttaaaaagccgggtgtatcaggacacggtgtttatgaactg
aaggctgaataccttgatcaatttaatgtgttcttttatcattacaccaaaacacagcgc
agcaaggcggaacacacacagaagaaaaggcgaaaacaagaaaacagctcagaagcatta
gtccctcctgctcctcccgatttcagttcagctttccgaaatgtgatcaacctcctgagc
tgtgatgttatgatgcatattctacaaaccgtcctgcagagagccacagaggaagatcca
atcatgtggacagaaggcataatacaaatggctctccatattatagccctgggtttatta
gaagagaagcaacagctacagagggctgctgaaaatgaagtaacattccacttctatcat
aaggcaacaagggtcgggactgcagatctaaatgcagaaagtcttgtgacactgctggag
aagctaaagagcattacacagctggaggcccagaaagacatgatcatttgggtgcggcaa
ctatttgaaaccgtaaaaggtctgagagaggcatccagtcacaccgttcccacaggtgca
ccttctgacgttgtaaaagctgaagaggcttccatgacttccatggttctcacttttcag
ggacaaagccccctagagaaggagaagcgcaaaaggaaagcggaggcggcccggctccac
cgccagaagattatggcacagatgtcggctttacagaaaaatttcattgaaacaaacaaa
cttctatatgacaccactgtggaagtacatgatagcactagtcctgtagaagagagcccg
ttattagcagaggaaggatctaaggttgtactagggccaaaacgtggccccacagtgccc
agcaaagatgttcttacatgtatcctctgtcaagaagaacaggaggttagattggacaag
cctacaatggtgctaactgcctgtgttcagaagtctacagcattgtctcaaactcgtggc
aaagtggttgcacacacaggagaaacatttgatccactttttacaaacccagagatgttg
tatggaacccatacaggcagctgcggccatgtaatgcatgttgtgtgctggcaaaagttc
tttgaggcaatgcagaaaaatactcagcagcgtcttcatgtggagctaatttttgacctt
ggaaatggcgaatacctatgtcccctatgcaaatgccactgtaacactgttatacctatc
atccctcatgttgcacagcaaataaaaagtgtggatgctgaagccataaactgtgttttc
tcacttcctcactggttggatatagtggctgccaggatatccggttataatttcaacacc
atcaaaggaacaaagccaatcactcctgaattctgtcaaattcatcaagaccagaattat
gagttccgttccatcttgagctttggcgtgcaggctccgccccgttatccaaccagcacc
gaaggaatgcttgttcactttgccaccacagtgtaccgtgtgggtttgaatgttcctccc
aatgagtctgatctacggatgcctgtcatggcatggaatacttgtgcttttacaatccag
tgtatagaaagctggcttcgggatgaagaaaaacccttgtttggatccttgcagaatcgg
caacatgctggattacaagcgttggtgaaatttactgaagcccaaagagttacctgccct
caacccttgatacagagacatcttatccagttattagcagtgttcttgccaaacattaac
attgaagacaccccatccttcctgtctgtggatgttttccatctgctggtggggtcagtg
ttggcattcccagcattatattgtgaagacaatgtagacttacatccttcaacccttgtt
tctacctacaacaatctctacctcttccacctgctcacaatgactcacatactgcaaatc
atcatatctttagctacagacaatgtgccttctacagaacctgatgactgtgaagaagcc
cgtacagctgctactctttgtcaggatatcgcacaactcaccaacaattgtgtaacagtt
gatcttcccggttggtatgtttggaaatgtgtgagagagggcatcatgccatacctgcga
tgtgcagcgttgttcttccattatttgctgggagtaatgcctccagaggagcttcaatca
tcaggcactacagacaatcagttaccagcgctttgcagcttcctctgcttgccaaccaac
attcttcttctttttcaagagaacaaggacactgtgaaacttcttattcagagcaggatg
agttctgaccaattcctgcagagtgtcctagctggtaagactactgcactcaggtaccca
aggaaacgcaatacactgatagagcttcctgaagattacagttccctcctaaaccaagcg
tcccagtttaaatgccccaagtctcaagatgctgagcggaaacacccagtgatgtgtctt
ctctgtggggccatcctctgttcccagaatacatgctgccaggaggtggtaaatggagaa
gagctgggagcttgtacagtacatgccatgcactgtggagcaggtgtctgcatctttctc
agaatcagagaatgcaaagtggtcttaatggagggtaaaacaagaggctgtatctaccct
gctccctatcttgatgaatatggagaaacagaccctggactgaagcgtggaaacccctta
cacctttgccatgagcgatatcggaaattacatcagttgtggcagcagcattgtattatt
gaggagattggacacaaccttgaaatcaaccagatgttttttggctttaattggagcctg
ctttag
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integrated database retrieval system
