Xenopus laevis (African clawed frog): 108702974
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Entry
108702974 CDS
T01010
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X2
KO
K04834
voltage-gated sodium channel type II alpha
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108702974
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108702974
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
108702974
NCBI-ProteinID:
XP_018094323
UniProt:
A0A8J0U0K8
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Position
9_10S:complement(64516073..64614588)
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AA seq
2017 aa
AA seq
DB search
MEQPLLPPPGPDSLRLFTRESLAALEKRIAEEKATKPPKDRRDDDDENGPKPNSDLEAGK
NLPFIYGDIPSGLVAVPMEDLDPYYSNQKTFIVLNRGKAIFRFSATSALYILTPFNPIRR
ISIKILVHSLFSMLIMCTILTNCFFMTMSNPPEWTKNVEYTFTGIYTFESLVKILARGFC
LEGFTFLRDPWNWLDFSVISMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGHLRNKCVRWPPDYEPNITSYFNETAGIY
INITMNPYNHEEYMHDERNFYFLPGMRDALLCGNSSDAGQCPKGYECMKTGRNPNYGYTS
FDSFGWAFLSLFRLMTQDFWENLYQLTLRTAGKTYMIFFVLVIFLGSFYLINLILAVVAM
AYEEQNQATLEEAEQKEAEFQLMMEQLKKHQEEIQAVALAAEGMDGSREFSGGTGYGGLS
ESSSEASRPSSKSAKERRNRRKKRKQKEQGDGDEKGDDEKFHKSASETSIKRKGFRFLEG
NRLTSDKKYSSPHQSRLSFRGSLFFPRRDSRASLCSFRGRGKDVGSENDFADDEHSTFED
NESRRGSLFVPHRHGERRNSNISQTSKASRTLPVLPVNGKMHSTVDCNGVVSLLGGPSGP
TSPTGLLLPEVIIDKPASDDNGTNTENELRKRRLSSYRVSMDFLEDPILRQRALSIASNL
TNTMEELEESREKCPPCWNKFANTYLIWDCCDSWLKIKHVLNVIVMDPFVDLAITICIVL
NTLFMAMEHYPITEEFASVLNVGNLVFTGIFTAEMVFKLIALDPYYYFQVGWNIFDGIIV
SLSLMELGLSDVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKECVCKIAPECELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATEDDNEMNNLQIAVARMH
EGIAYVKKSVREFIQNAFVKKQKALEETKPLEDLQNQKDSCISNHTTVEVSKEYDHLKDG
NVTTATSGIGSSVEKYIIDESDYMSFIHNPSLTVTVPIAVGESDFENLNTEEFSSESDME
ESKEKLNSSSSSEGSTVDIRPAGEGEPVPQVEVEEFEEPEACFTEGCIRKYPCCNVDASH
GKWKQWWNLRKTCFLIVEHNWFETFIIFMILMSSGALAFEDIYIEQRKTIKIMLEYADKV
FTYIFILEMLLKWVAYGFQKYFTNAWCWLDFLIVDVSLVSLVANAMGYSELGAIKSLRTL
RALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNMFSGKYGYCAN
YTDDTVFDYTKVNNKSQCMDLVRDNETARWKIVKVNFDNVGFGYLSLLQVATFKGWMEIM
YAAVDSRQQEEQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDI
FMTEEQKKYYNAMKKLGSKKPQKPVPRPDNKFQGAVFDFVSKQPFDITIMILICLNMVTM
MIETDDQSDEVENNLYWINAVFIVLFTGECVLKLISLRHYYFTMGWNIFDFVVVILSIVG
MFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGE
PDCSPKAEHSGSSVKGDCGNPSVGIFFFVSYIIVSFLVVVNMYIAVILENFSVATEESAE
PLGEDDFERFYEVWEKFDPNATQFIQYIKLTDFADALDPPLRMPKPNNVQLIAMDLPMVS
GDRIHCLDVLFAFTKRVLGEGDEMDNLRQPMEERFMASNPSKASYEPITSTLRRKQEELA
AIVIQRCYRRYALKKGIKHASFLYSQEKSKDGGSLLTRKDMLSDRLNGNSTTEKADITPS
TTSPPSYDSVTKPDKEKHEKDKIEKEDRGKDVREHKK
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaccactgctacccccaccaggacctgacagccttcgactcttcaccagagaa
tctcttgctgctcttgaaaagcgcattgcagaagaaaaagccacaaagccacccaaggat
cgcagagacgacgatgatgaaaatggacccaagccaaattcggacttggaagctggcaaa
aacttaccatttatatatggagacattccatcaggattggtggcagtaccaatggaagac
ctggacccatattacagcaaccaaaagacttttatagtattgaatagagggaaggcaatc
ttccgcttcagtgccacatctgccttgtacattttaactcctttcaatcctattagaaga
atatctataaagattttggtacattctttattcagcatgctcattatgtgcactattttg
accaattgcttcttcatgaccatgagtaacccaccagaatggaccaagaatgttgaatat
accttcactggaatttatacatttgaatcgcttgttaaaatacttgcaagaggtttttgt
ttagaaggctttacttttctacgggatccatggaattggcttgatttcagcgtcatatcc
atggcgtatgtaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcaga
gtattgagagctttgaaaactatttctgtaattccaggcctgaagactattgtgggcgca
ctgattcaatcagttaagaagctttcggatgtcatgattctcacagtcttttgcctcagt
gtgtttgcactcatagggttacagcttttcatggggcacctgaggaacaagtgtgtaagg
tggccgcctgattatgaaccaaatattacttcctactttaatgaaactgctggcatctat
ataaatataactatgaacccatataatcatgaagagtacatgcatgatgaaagaaatttt
tattttttgcctggaatgagagatgctcttttgtgtggcaacagctcagatgcagggcag
tgtccaaaaggatatgaatgtatgaagactggaaggaaccctaactatggttacacaagt
tttgactcatttggctgggcttttttatcactgtttcggctaatgactcaggatttctgg
gaaaatctttatcaactgactctacgaactgctggtaaaacctatatgatattttttgtg
ttggtgattttcctgggttctttctatctgattaacttgatcttggctgtggtggcaatg
gcttatgaagagcagaatcaggcaacattagaagaagcagagcagaaagaagcagaattc
cagcttatgatggagcaactaaaaaaacatcaggaagaaattcaggcagtggcattagca
gcagaaggaatggacggttccagagaatttagtggtggaacaggctacggtgggctttca
gagagctcttctgaggcttcaagaccaagctcgaaaagtgctaaggagagaagaaatcga
aggaaaaagagaaaacaaaaagagcagggtgatggagacgagaagggcgatgatgaaaaa
ttccacaagtcagcttcagaaacaagcataaagaggaaaggctttcgctttttagaagga
aaccgactgacctctgataaaaagtactcttccccacatcagtcccgcctcagttttcgt
ggctccctctttttcccaaggcgtgatagtagagcaagcctgtgtagcttcagaggccgt
gggaaggatgtaggatcagaaaatgattttgcggatgatgaacacagcacgtttgaggac
aacgaaagtcgaaggggttcattgtttgttccacacagacatggagagagaagaaatagc
aacataagtcaaacgagcaaggcatcaaggaccctaccggtgctaccagtgaatgggaag
atgcatagcacagtggattgcaatggagtggtctctctgcttggtggtccatcaggtcca
acatcgcctactggactacttctgccagaggtgataatagataaaccagcttctgatgac
aatggaaccaatactgaaaatgaactgaggaaaaggagactcagttcgtatcgtgtttct
atggattttctggaagatccaattcttagacaaagggctctgagcattgccagcaatcta
acaaatacaatggaagaacttgaagaatccagagaaaaatgcccaccatgctggaataaa
tttgccaatacatacctaatctgggattgctgtgacagctggcttaaaataaagcatgta
ctcaacgtgattgtaatggacccatttgtggatcttgcaataacaatctgcattgttttg
aatacactgtttatggcaatggagcattacccaataactgaagaatttgcaagtgtgctc
aatgtgggaaatttggtgtttacaggcatatttactgccgagatggttttcaagctaatt
gccctagatccctattactatttccaagttggctggaatatattcgatgggattattgtc
agtctcagcttgatggaacttggtctttcagatgttgaagggttatcagttcttcgatct
ttcagattgcttcgtgtattcaagttggcaaaatcctggcctacactgaacatgcttata
aagattattggcaattctgtaggagctttgggaaacctgaccctggtgttggccatcatc
gtctttatttttgctgtggttgggatgcagctgtttggtaaaagttacaaggaatgtgtc
tgcaaaattgcaccagaatgtgaacttcctcgctggcacatgaatgacttcttccactcc
ttccttattgtgttccgagttctatgtggggaatggattgaaaccatgtgggactgtatg
gaggttgcaggacaagctatgtgtctcactgtatttatgatggttatggttattggaaac
ttagtggttttaaatttgtttttagctttgctgctcagctcatttagctcagacaatcta
gctgctacagaggatgataatgaaatgaacaatctacaaattgcagtggccagaatgcat
gaaggaatagcctatgtgaaaaagagtgtacgggaatttatacagaatgcctttgtcaaa
aagcaaaaggccttagaagaaaccaaacctttagaagacttgcagaaccaaaaggacagc
tgcatttccaatcacaccaccgtggaagtaagcaaagagtatgaccacctgaaggatgga
aacgtaacaactgccacaagtggcataggcagtagcgtagaaaagtacataatagatgag
agcgactacatgtctttcattcataacccaagcctcaccgtcactgtccctatcgctgtg
ggggagtccgattttgagaatctgaacacagaggaatttagtagtgaatctgacatggaa
gaaagcaaggagaagctcaactcatccagctcatcagaaggcagtactgtagacatcaga
cctgctggggagggagaacctgttccacaggtggaggttgaagagtttgaggagccagaa
gcttgtttcactgaagggtgcatcaggaaatacccatgctgtaatgttgatgcctcacat
ggcaaatggaagcagtggtggaatctcagaaaaacatgtttcctaatcgtagaacacaac
tggtttgagaccttcataatctttatgattcttatgagtagtggtgctctggcattcgaa
gatatttacatagaacaaagaaaaacaataaaaataatgttggaatatgcggacaaggtt
ttcacttacatctttatcttggaaatgcttctgaaatgggttgcatatggctttcagaaa
tacttcaccaatgcctggtgttggttggacttcctaattgttgatgtttctttggttagc
ttagtagctaatgccatgggctactcagaattaggagctattaagtcccttaggacacta
agggcattgagacctctgagggccctctcacggtttgaagggatgagggttgtagtgaat
gcccttgttggagccattccatccattatgaacgtccttctggtttgcctcatattttgg
ctcatttttagcataatgggagttaacatgttttctggaaagtatggctactgtgcaaat
tacacggatgatactgtgtttgactacacaaaagttaataataagagccaatgcatggat
cttgttagagacaatgaaacagccagatggaaaatcgtgaaagtgaattttgataatgtg
ggatttggatatctttctttgctgcaggtggctacattcaaaggatggatggaaataatg
tatgcagctgttgactcacgacagcaagaggaacagccaaaatatgaagacaacctgtat
atgtatttgtacttcgttatttttatcatttttggatcgtttttcactcttaaccttttc
attggtgtcatcattgataactttaaccagcagaagaagaagttcggaggtcaagatatc
tttatgacagaagagcaaaaaaaatattacaatgcaatgaagaagctggggtccaagaaa
ccacaaaaacctgttccaagaccagataataaatttcaaggtgccgtctttgattttgtc
tccaaacaaccgtttgatataaccattatgattctgatctgtttaaatatggtaaccatg
atgattgaaacagatgaccaaagcgatgaagtggagaacaacctgtactggataaatgct
gtttttattgttctttttactggagaatgtgtactcaagttgatatccctacgccactat
tacttcacaatgggctggaacatatttgattttgtggttgtaattctctctatagtagga
atgtttctggccgatcttattgaaaaatattttgtgtcacccaccctgttcagagtcatc
cgattagctaggattggtcgcatcctgcgtctcatcaagggagctaaaggcattcgtact
ctgctgtttgctctgatgatgtcacttcctgctttgttcaatattggtttactgctcttt
ttggtgatgttcatctacgccattttcggcatgtccaactttgcctatgttaagaaagaa
gctggaattgatgacatgtttaactttgagacctttggtaacagcatgatctgtttattc
caaattacaacttctgcaggatgggatggtcttttagcaccaattcttaacagtggggag
ccggactgcagtccaaaggcagaacactcaggaagcagtgtaaaaggtgattgtggcaat
ccttctgttggcattttcttttttgttagctatatcatagtatcattcttggttgtagta
aacatgtatatagctgtcatcttggaaaacttcagtgttgctactgaggaaagtgctgaa
ccattaggagaagacgattttgagaggttctacgaggtctgggaaaaatttgatccaaat
gcaacacaatttatacaatacattaagctgactgattttgctgatgcactggatccacct
ctccgaatgccaaaaccaaacaatgtccagttaatagcaatggatctgcctatggtgagt
ggggacagaattcactgccttgatgtcctgtttgcctttacaaagcgtgtgttaggtgaa
ggtgatgaaatggataacttaagacagccgatggaggaacgattcatggcatccaatcct
tcaaaggcttcctatgaaccaatcacatctactttacgaaggaaacaagaggagttagct
gctatagttattcagcgctgctacagacgctatgctttaaagaaaggcataaaacatgct
tcctttttgtacagccaggaaaagagcaaagatggagggagtctacttacaaggaaagat
atgttgagcgatcgactaaatggaaactctacaacagagaaagcagacattactccttca
acaacgtctcctccatcctatgacagtgttacaaaaccagataaagaaaaacacgaaaaa
gacaaaatagaaaaggaagacaggggcaaagatgtcagggagcataaaaaataa
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