Xenopus laevis (African clawed frog): 108706580
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Entry
108706580 CDS
T01010
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108706580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108706580
Ion channels [BR:
xla04040
]
Ligand-gated channels
GABA-A
108706580
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
108706580
NCBI-ProteinID:
XP_041435389
UniProt:
A0A8J1M127
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Position
1S:27348885..27576492
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AA seq
477 aa
AA seq
DB search
MWTLRGRGYFGVVWFPMMIAMVCCAHSVNEPSNMSYVKETVDRLLKGYDIRLRPDFGGPS
VEVGMRIDVASIDMVSEVNMDYTLTMYFQQSWRDKRLSYSGIPLNLTLDNRVADQLWVPD
TYFLNDKRSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIQFYWNGGGKAITGVEKIELPQFSIVDYKMVSRNVIFSTGAYPRLSLSFRLK
RNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTISTHLRETLPKI
PYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGKGPQLQKKAAEKAEKANNEKTKVEMNK
VQVDAHGNILLTTLELRNEVSGSEVLTSISDPRATMYSYDSASIQYRRPVANRDLYSRST
LDRHVVHKKGRLRRRASQIKIKIPDLTDVNGIDRWSRMIFPVAFTFFNVVYWLYYIH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtggactctccggggcagaggctatttcggcgtcgtgtggttccctatgatgattgcc
atggtgtgttgcgctcacagcgttaacgagcccagcaacatgtcatatgtgaaggaaaca
gtggacagattgctcaaaggatatgacattcgcttgaggccagacttcggaggcccttca
gtggaggttgggatgcgaatagacgttgccagcatagatatggtctcagaagtcaacatg
gattacacactaacaatgtacttccagcaatcatggagagacaaaagactatcatactct
gggattcctctaaatctaaccttggacaacagggtcgctgatcagctgtgggtgccagat
acatacttcctaaacgataaaaggtcttttgttcatggcgtcacagtgaaaaacagaatg
attcgacttcatcctgatggaactgttctttatggccttaggataacaacgacagctgct
tgtatgatggatctgagacgatatcctttggatgaacaaaactgcacacttgaaattgaa
agttatggctatacgacagatgacattcagttttattggaatggagggggcaaagccatc
acaggagttgaaaagattgaactgcctcagttttccattgtcgactataaaatggtttca
aggaacgtcattttctccactggtgcctatcctcgactgtcacttagttttcgcctgaaa
agaaatattggatacttcattttacaaacctatatgccttcgacactgattacgattctg
tcatgggtatccttctggatcaattatgacgcatcagctgcaagagttgctttagggatt
acaactgtacttacaatgacaacgatcagcactcatctcagagagacgctacccaaaatt
ccctatgtaaaggccatagatatctatctgatgggatgtttcgtatttgtgttcctagct
ttgcttgaatatgcctttgtcaactatatattctttggaaaaggtcctcagctccagaag
aaagcagcggaaaaggcagagaaagcaaataatgaaaagacaaaggtggaaatgaacaaa
gttcaggtcgacgctcacggaaacattctccttacaacccttgaactcagaaatgaagtc
agcggctccgaagtgttgacaagtatcagcgacccaagggccaccatgtactcgtacgac
agcgcaagcatccagtaccgcagaccagtggccaacagagatttgtacagcagaagcact
ttagataggcacgttgttcacaaaaaggggcgcttgaggagaagggcatctcagattaaa
attaagattcctgatttgactgatgtgaatggcatagacagatggtccaggatgatattc
cctgttgcttttaccttttttaatgttgtctattggctttactatatacactaa
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