Xenopus laevis (African clawed frog): 108708683
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Entry
108708683 CDS
T01010
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xla04040
]
108708683
Ion channels [BR:
xla04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108708683
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
108708683
NCBI-ProteinID:
XP_018103124
UniProt:
A0A974HZE4
A0A1L8HIT8
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Position
2L:160080511..160224952
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AA seq
966 aa
AA seq
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MAQFYYKRSSNSPYQDRIPLRIVRSESELSPSEKSYLVAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLELIELLLSYNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGEKQVPPILLDKQFSEFTPDITPIILAAHTNNYEIIKHLVQKGVSVPRPHEVRCNCVE
CVSGSDVDSLRHSRSRLNIYRALSSPSLIALSSEDPFLTAFQLSWELQELSKVENEFKSE
YEELSSQCKQFAKDLLDQTRSSRELEIILNYRDDGGLLDESNGNDLARLKLAIKYRQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWVVKMVTCVIIGLLFPVFSCCYLIAPKSTFGLFIR
KPFIKFICHTASYLTFLFLLLLASQHINKTELQGPAPTIVEWMILPWVLGFIWGEIKQMW
DGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYVKFHGQRNRAEWEMWHPTLVAEAVFA
IANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYYE
TDGKSLGCKGIRCEKQNNAFSTLFETLQSLFWSIFGLINLYVTNVDPKHEFTEFVGATMF
GTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFEEGGTLPTPFNIIA
SPKSLWYLIKWMRKQICKKKMKRKPESFGAIGRRAADNLRRHNQYQEVMKNLVKRYVAAM
IRDAKTEEGLTEENFKELKQDISSFRFEVLGLLKGNKFNIQSSKMNNGVADILETEEKSK
IKEKRSRSQKKTFSLFDITTMIHPKSAVIASEVQNSVSNGSALLASELTKEKQRKNSFVT
DIKNLGFFHSRPKSNFSVPISKTIYSVSEEVANQDTESCENTVDVQVKDSGPNCELNVNK
LKEQYSLPPSIENTSEILSLEPLDSQHSSVVLTEHSADARKQTDSPADENSTTVDSVNEE
DSTTRL
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttttactataaaagaagctccaactcaccctaccaggaccggattcctctg
cgcattgtgcgttcagaatcagagctctccccatctgagaaatcctacctggtcgctgta
gaaaaaggggactatgccagcgtaaaacaagcactcgaagaagctgaaatatattttaag
ataaatattaactgcattgatcctttgggaagaactgctttacttattgccattgaaaat
gagaaccttgaactgattgagctacttttgtcttacaacgtctatgttggtgatgcatta
ctgcatgctataagaaaagaagtcgtgggggcagtagaactacttttaaatcacaagaag
ccaagtggagaaaaacaggtccccccaatcctcctagataaacagttctcagaatttaca
ccagatataactccaataatattggctgctcacacaaacaattatgaaatcataaagcat
ttggtacaaaagggcgtttccgtgccaaggccccacgaggttcggtgcaattgtgttgaa
tgtgtttcaggctctgatgtggatagcctccgacattcccgatccaggctaaatatctac
agagctctgtcgagtccctctcttattgcattatccagtgaagatccatttttgacagct
tttcagttgagctgggagttgcaagagttgagcaaagtggaaaatgaattcaaatcagag
tacgaggaactgtcaagtcagtgtaagcagtttgccaaagatcttctagatcagacacgg
agttccagagaattggaaattattctcaactacagagatgatggtggattgttggatgaa
tcgaatggcaatgaccttgctcgattaaaactggcaataaaatatcgccagaaagagttt
gttgctcagcccaattgtcaacagctgcttgcctctcgatggtacgatgagtttccaggt
tggaggagaagacactgggtagtgaagatggtgacctgtgttataataggactgctcttc
cctgtcttctcttgttgctacttaatagctcctaaaagcaccttcggactcttcatcaga
aagcctttcatcaagttcatctgtcacactgcatcatacttgacttttctgttccttctt
ctactggcatcacaacatatcaacaagacagagctgcagggacccgcaccaaccattgtt
gagtggatgatattaccgtgggttttgggcttcatatggggagaaattaaacaaatgtgg
gatggtggattccaggattatatccatgactggtggaacttgatggattttgtgatgaat
tccttatatttggcaacaatttcattgaaaattgttgcatatgtcaagtttcatggacag
cgcaatcgagcggaatgggaaatgtggcaccctacactggtcgcagaagcagtttttgct
attgccaacatcttcagctccttgcgactgatctcattgtttacagcaaattctcacctg
ggtcctctacaaatctctttagggagaatgctgctggatattttaaagtttctatttata
tattgccttgtattgctggcatttgcaaatggcttgaaccaattatatttctactatgaa
acggatggtaaaagcctaggctgcaaaggaatcaggtgtgaaaaacagaataatgccttc
tcaacgttatttgaaacgttgcagtctctgttctggtctatttttggccttatcaacttg
tatgtgacaaatgtagatccaaaacatgaattcacagaatttgttggagccacaatgttt
ggaacctataatgtcatctctctggttgtgcttctaaacatgttaattgccatgatgaac
aattcataccagcttattgctgaccatgcagatattgaatggaaatttgcaagaacaaag
ctgtggatgagctactttgaagaaggagggacacttcccaccccctttaacataattgcg
agcccaaagtctttatggtatttaattaaatggatgagaaagcagatctgtaagaagaaa
atgaaaaggaaacctgaaagctttggagctatagggagaagagcagctgacaatttgcga
agacataatcaataccaggaggttatgaaaaatctggttaaaagatatgttgcagccatg
atcagggatgcgaagaccgaagagggtttaacagaggaaaattttaaggaattaaagcag
gacatttctagctttcgctttgaggttttggggttgcttaaaggaaacaaatttaatatc
caatcttcaaaaatgaataatggcgttgcagatatcctagagactgaagaaaaaagtaaa
ataaaggaaaaaagaagtcgatcacagaaaaaaactttcagcctctttgacataaccact
atgatccatcccaaatcggcagtaatcgcctctgaagtacaaaacagcgtgagcaatggg
tctgccttattggcctcagaactaaccaaggagaaacagagaaaaaacagctttgtcaca
gacataaaaaacttaggctttttccacagtcgtcccaaatcaaacttctcagttccgatt
tccaagacaatctactctgtttctgaagaggtcgccaaccaagacacggaatcgtgtgaa
aacacagttgacgtacaagtcaaagattcagggccaaactgcgaactaaatgtcaataaa
ttaaaggaacaatattccctccctcccagcatagaaaatacctcagaaattctgtctctt
gaacccttggacagtcaacacagttctgtagttttaacggaacattctgcagatgcccgt
aaacaaactgattcgcctgctgacgaaaatagcacaacggttgactctgtcaatgaagaa
gattctacaacaagactgtga
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