Xenopus laevis (African clawed frog): 108708733
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Entry
108708733 CDS
T01010
Symbol
mmp1.L
Name
(RefSeq) matrix metalloproteinase-18-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
xla
Xenopus laevis (African clawed frog)
Pathway
xla03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108708733 (mmp1.L)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xla01002
]
108708733 (mmp1.L)
Enzymes [BR:
xla01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
108708733 (mmp1.L)
Peptidases and inhibitors [BR:
xla01002
]
Metallo peptidases
Family M10
108708733 (mmp1.L)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_5
Astacin
Reprolysin_3
Reprolysin_4
DUF4953
Motif
Other DBs
NCBI-GeneID:
108708733
NCBI-ProteinID:
XP_018103248
Xenbase:
XB-GENE-17333196
UniProt:
A0A1L8HJ86
A0A974DRB1
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All DBs
Position
2L:complement(168988532..168996993)
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AA seq
467 aa
AA seq
DB search
MNCLLLKLLLCVALTAALPIDKQDEPPATNEEMAENYLKRFYGLETEGGPVGGKKNIQLF
TEKLQQMQRFFGLKVTGTLDPKTVEVMQKPRCGVYDVGQYSTIPKSSTWQKKDLTYRILN
FTPDLPQADVETAMQKAFKVWSDVTPLTFTRLYNEASDIEISFAAGDHRDNSPFDGSGGT
LAHAFQPGNGIGGDAHFDEDETWTKTTEIYNLFLVAAHEFGHSLGLFHSTDPGALMYPTY
PSTDPNAFHLPQDDINAIQYLYGKSPNPVQPTGPTTPSRCDPNTVFDAVTTLRGELIFFV
NRFLWRKHPQASKAELIFIQAFWPSLPNTIDASYENPITEQILVFIGSNYSVLNGFDLVP
GYPRDIYGLGFPRTVKSIDAAVYIEHLGKTYFFADGKYWRFDEDKQQMDTGFPKLISNDF
PGIPDKIDAALYYRGRLYFYIGPSQFEYDINSKRILEVLRSNSWLGC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaactgcctcctgctgaagctgctactgtgcgtagccctcaccgctgccttaccgatt
gataaacaagatgagcccccagcaacaaatgaagaaatggctgagaattacttgaagaga
ttttatggtcttgaaactgaggggggacctgttggaggaaagaaaaacatccaactgttc
actgaaaagctccagcagatgcagagattttttggcttaaaggtgacaggaacactggac
cccaagacagtagaagtaatgcaaaaacctagatgtggcgtctatgatgttggccagtac
agcacaatcccaaaaagttctacatggcagaagaaagatctaacttacagaattctaaac
ttcactcctgacctgcctcaggctgatgtggagactgcaatgcaaaaagcttttaaagtt
tggagcgacgtgacacctttgacctttacaagactctacaatgaagcatcagatatagaa
atctcattcgcagctggagatcacagagacaattctccttttgatggatcaggtggaact
ttggcccatgcctttcagcccggcaatggcattggtggagacgctcattttgatgaagat
gaaacctggacaaagaccactgaaatatataatctgtttcttgttgctgcccatgaattt
ggacactcgctgggactttttcattccactgatccaggtgctttgatgtatccaacatac
ccaagtactgaccccaatgcatttcatcttcctcaggatgatataaatgctatacaatat
ctatatggaaaatcccccaatccagtccaaccaactggcccaacaactccttccagatgt
gatccaaacactgttttcgatgctgtcactacgttgcgaggagaactgattttcttcgtg
aacaggtttttatggagaaagcatccccaagcatccaaggctgaactcatatttatacaa
gcattctggccatcgctgcccaatacgattgatgcttcttatgaaaatccaataacggag
cagatcctcgtgtttataggatcaaattattcagttcttaacggctttgatttagtacct
ggttatcccagggacatctacggactgggatttccaaggaccgtgaaaagtattgatgcg
gctgtttatatcgagcacctggggaaaacatatttctttgcggatggtaaatactggaga
tttgatgaagataaacaacaaatggacactggctttccaaagctaataagcaatgatttt
cctggaatccctgataaaattgatgcagctctttattatagaggccgcctgtatttctac
attggaccgagccagtttgaatacgacatcaactctaaaagaattttagaggttttaaga
agcaacagctggttgggctgttaa
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